BayesX: R Utilities Accompanying the Software Package BayesX

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This package provides functionality for exploring and visualising estimation results obtained with the software package BayesX for structured additive regression. It also provides functions that allow to read, write and manipulate map objects that are required in spatial analyses performed with BayesX, a free software for estimating structured additive regression models (http://www.bayesx.org).

Author
Thomas Kneib, Felix Heinzl, Andreas Brezger, Daniel Sabanes Bove, Nadja Klein
Date of publication
2014-08-18 16:46:47
Maintainer
Thomas Kneib <tkneib@uni-goettingen.de>
License
GPL-2
Version
0.2-9

View on CRAN

Man pages

add.neighbor
Add Neighborhood Relations
BayesX-package
R Utilities Accompanying the Software Package BayesX
bnd2gra
Convert Boundary Format to Graph Format
createxymap
Create map objects for some points and a given distance
delete.neighbor
Delete Neighborhood Relations
drawmap
Drawing Geographical Information
extractSamples
Extract MCMC samples from a BayesX results directory
fuse
Combine Regions
get.centroids
Compute Centroids of Polygons
get.neighbor
Obtain Neighbors of Given Regions
getNumbers
Extract numbers from (BayesX log file) strings
hpd
Computing Highest Posterior Density (HPD) Intervals
nbAndGraConversion
Convert nb and gra format into each other
plotautocor
Computing and Plotting Autocorrelation Functions
plotnonp
Plotting Nonparametric Function Estimates
plotsample
Plotting Sampling Paths
plotsurf
Visualise Surface Estimates
read.bnd
Read Geographical Information in Boundary Format
read.gra
Read Geographical Information in Graph Format
ringDirxy
Compute direction of points in a polygon.
round.bnd
Round Boundary Information
shp2bnd
convert a shape-file into a boundary object
spAndBndConversion
Convert sp and bnd format into each other
write.bnd
Saving Maps in Boundary Format
write.gra
Saving Maps in Graph Format

Files in this package

BayesX
BayesX/inst
BayesX/inst/examples
BayesX/inst/examples/surface.raw
BayesX/inst/examples/northamerica_adm0.shx
BayesX/inst/examples/germany9301.bnd
BayesX/inst/examples/northamerica_adm0.shp
BayesX/inst/examples/germany2001.bnd
BayesX/inst/examples/nonparametric.raw
BayesX/inst/examples/spatial.raw
BayesX/inst/examples/germany.bnd
BayesX/inst/examples/germany.gra
BayesX/inst/examples/tanzania.bnd
BayesX/inst/examples/nonparametric_f_x_pspline_sample.raw
BayesX/inst/examples/germany.raw
BayesX/inst/examples/surface_f_x1_x2_pspline.res
BayesX/inst/examples/samples
BayesX/inst/examples/samples/res_f_district_spatial_sample.raw
BayesX/inst/examples/samples/res_f_district_spatial_var.res
BayesX/inst/examples/samples/res_scale_sample.raw
BayesX/inst/examples/samples/example.prg
BayesX/inst/examples/samples/res_f_x1_pspline_sample.raw
BayesX/inst/examples/samples/res_f_district_spatial.res
BayesX/inst/examples/samples/res_f_x2_rw_sample.raw
BayesX/inst/examples/samples/res_f_x1_pspline_var.res
BayesX/inst/examples/samples/res_f_district_spatial_lambda.res
BayesX/inst/examples/samples/res_stata.do
BayesX/inst/examples/samples/res_predictmean.raw
BayesX/inst/examples/samples/res_f_x1_pspline.res
BayesX/inst/examples/samples/res_model_summary.tex
BayesX/inst/examples/samples/res_r_splus.txt
BayesX/inst/examples/samples/res_FixedEffects1_sample.raw
BayesX/inst/examples/samples/tanzania.bnd
BayesX/inst/examples/samples/log.txt
BayesX/inst/examples/samples/res_scale.res
BayesX/inst/examples/samples/res_f_x1_pspline_variance_sample.raw
BayesX/inst/examples/samples/res_f_x2_rw.res
BayesX/inst/examples/samples/res_FixedEffects1.res
BayesX/inst/examples/samples/data.txt
BayesX/inst/examples/samples/res_f_x2_rw_variance_sample.raw
BayesX/inst/examples/samples/res_f_district_spatial_variance_sample.raw
BayesX/inst/examples/samples/res_f_x2_rw_lambda.res
BayesX/inst/examples/samples/res_deviance_sample.raw
BayesX/inst/examples/samples/res_graphics.prg
BayesX/inst/examples/samples/res_f_x1_pspline_lambda.res
BayesX/inst/examples/samples/res_f_x2_rw_var.res
BayesX/inst/examples/samples/createData.R
BayesX/inst/examples/nonparametric_f_x_pspline.res
BayesX/inst/examples/northamerica.bnd
BayesX/inst/examples/createdata.R
BayesX/inst/examples/northamerica_adm0.dbf
BayesX/inst/examples/spatial_f_regions_spatial.res
BayesX/inst/examples/examples.prg
BayesX/inst/examples/nonparametric2_f_time_pspline.res
BayesX/inst/ChangeLog
BayesX/NAMESPACE
BayesX/R
BayesX/R/plotsurf.R
BayesX/R/extractSamples.R
BayesX/R/drawmap.R
BayesX/R/fuse.R
BayesX/R/ringDirxy.R
BayesX/R/read.bnd.R
BayesX/R/delete.neighbor.R
BayesX/R/shp2bnd.R
BayesX/R/nbAndGraConversion.R
BayesX/R/getNumbers.R
BayesX/R/plotnonp.R
BayesX/R/add.neighbor.R
BayesX/R/round.bnd.R
BayesX/R/get.neighbor.R
BayesX/R/write.bnd.R
BayesX/R/spAndBndConversion.R
BayesX/R/get.centroids.R
BayesX/R/bnd2gra.R
BayesX/R/write.gra.R
BayesX/R/read.gra.R
BayesX/R/plotautocor.R
BayesX/R/createxymap.R
BayesX/R/hpd.R
BayesX/R/plotsample.R
BayesX/R/AAA.R
BayesX/MD5
BayesX/DESCRIPTION
BayesX/man
BayesX/man/plotsample.Rd
BayesX/man/write.gra.Rd
BayesX/man/plotautocor.Rd
BayesX/man/nbAndGraConversion.Rd
BayesX/man/extractSamples.Rd
BayesX/man/read.bnd.Rd
BayesX/man/getNumbers.Rd
BayesX/man/get.neighbor.Rd
BayesX/man/write.bnd.Rd
BayesX/man/get.centroids.Rd
BayesX/man/read.gra.Rd
BayesX/man/ringDirxy.Rd
BayesX/man/plotsurf.Rd
BayesX/man/BayesX-package.Rd
BayesX/man/fuse.Rd
BayesX/man/spAndBndConversion.Rd
BayesX/man/shp2bnd.Rd
BayesX/man/createxymap.Rd
BayesX/man/round.bnd.Rd
BayesX/man/drawmap.Rd
BayesX/man/delete.neighbor.Rd
BayesX/man/add.neighbor.Rd
BayesX/man/plotnonp.Rd
BayesX/man/bnd2gra.Rd
BayesX/man/hpd.Rd