This function takes a BioGeoBEARS results_object from a ML search, extracts the downpass and uppass likelihoods of the data for each possible state at the base of each left and right branch, and produces the ML ancestral split estimates for the bottom of each branch.
The results from a BioGeoBEARS ML search.
results_object with results_object$ML_marginal_prob_each_split_at_branch_bottom_BELOW_node added
Nicholas J. Matzke [email protected]
Loading required package: rexpokit Loading required package: SparseM Attaching package: 'SparseM' The following object is masked from 'package:base': backsolve Loading required package: Rcpp Loading required package: cladoRcpp Loading required package: ape Loading required package: phylobase Attaching package: 'phylobase' The following object is masked from 'package:ape': edges
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