get_leftright_nodes_matrix_from_results: Make a table of the Right and Left nodes descending from each...
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts

Description Usage Arguments Value Note Author(s) References See Also Examples

View source: R/BioGeoBEARS_readwrite_v1.R

This table shows the Right, then Left, descendant nodenums for each node. This gets used later to plot splits at corners.

1 2	get_leftright_nodes_matrix_from_results(tr, results_object, nodes)

`tr`	An ape phylo object
`results_object`	The results from a BioGeoBEARS ML search.
`nodes`	A list of internal node numbers for tree `tr`.

leftright_nodes_matrix A table with the Right, the Left, nodes

Go BEARS!

Nicholas J. Matzke matzke@berkeley.edu

http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster https://code.google.com/p/lagrange/

Matzke_2012_IBS

ReeSmith2008

get_lagrange_nodenums, LGpy_splits_fn_to_table, LGcpp_splits_fn_to_table

test=1

Loading required package: rexpokit
Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: Rcpp
Loading required package: cladoRcpp
Loading required package: ape
Loading required package: phylobase

Attaching package: 'phylobase'

The following object is masked from 'package:ape':

    edges