Files in BioVizSeq
Visualizing the Elements Within Bio-Sequences

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
R/meme_plot.R R/biovizseq.R R/geom_rrect.R R/ProtParam_calc.R R/gff_plot.R R/combi_plot.R R/plantcare_plot.R R/pfam_plot.R R/zzz.R R/combi_plot2.R R/smart_plot.R R/motif_plot.R R/cdd_plot.R R/globalvariables.R inst/shinyapp/app.R inst/shinyapp/global.R
inst/shinyapp/www/css/addhash.js
inst/shinyapp/www/css/custom.css
inst/shinyapp/www/css/chooser-binding.js
inst/shinyapp/www/css/script.js
inst/shinyapp/www/html/README.html
inst/shinyapp/script/mod_cddplot.R inst/shinyapp/script/mod_pfamplot.R inst/shinyapp/script/mod_advplot.R inst/shinyapp/script/mod_plantcaresub.R inst/shinyapp/script/homepage.R inst/shinyapp/script/mod_advplot2.R inst/shinyapp/script/mod_smartplot.R inst/shinyapp/script/mod_meme.R inst/shinyapp/script/mod_smart.R inst/shinyapp/script/mod_pfam.R inst/shinyapp/script/mod_gff.R inst/shinyapp/script/mod_plot.R inst/shinyapp/script/mod_gffplot.R inst/shinyapp/script/aboutpage.R inst/shinyapp/script/mod_plantcareloc.R inst/shinyapp/script/mod_memeplot.R inst/shinyapp/script/mod_geneinfo.R inst/shinyapp/script/mod_protparam.R inst/shinyapp/script/mod_plantcareplot.R inst/shinyapp/script/mod_plantcareplot2.R inst/shinyapp/script/mod_cdd.R
inst/extdata/mast.xml
inst/extdata/idpep.fa
inst/extdata/ID_rename.csv
inst/extdata/idpro.gff3
inst/extdata/idpro2.gff3
inst/extdata/order.csv
inst/extdata/hitdata.txt
inst/extdata/idpep.nwk
inst/extdata/group_class.csv
inst/extdata/ID_select.csv
inst/extdata/target.fa
inst/extdata/idpro.fa
inst/extdata/plantCARE_output.tab
inst/extdata/test.gff
inst/extdata/idpep2.fa
inst/extdata/iprscan.tsv
man/geom_rrect.Rd man/meme_plot.Rd man/plantcare_plot2.Rd man/plantcare_statistic2.Rd man/motif_plot.Rd man/plantcare_plot3.Rd man/meme_seq.Rd man/biovizseq.Rd man/combi_p2.Rd man/plantcare_to_loc.Rd man/gff_to_loc.Rd man/smart_to_loc.Rd man/fastaleng.Rd man/cdd_to_loc.Rd man/plantcare_plot1.Rd man/gff_plot.Rd man/smart_plot.Rd man/plantcare_plot.Rd man/meme_to_loc.Rd man/upload_fa_to_plantcare.Rd man/globalVariables.Rd man/plantcare_classify.Rd man/ProtParam_calc.Rd man/cdd_plot.Rd man/pfam_plot.Rd man/pfam_to_loc.Rd man/plantcare_statistic1.Rd man/gff_statistics.Rd man/combi_p.Rd
man/figures/README-cdd_step-1.png
man/figures/README-meme_step-1.png
man/figures/README-gff_one-1.png
man/figures/README-plantcare_one-1.png
man/figures/README-adv_plantcare-1.png
man/figures/README-pfam_one-1.png
man/figures/README-meme_one-1.png
man/figures/README-adv_plot-1.png
man/figures/README-cdd_one-1.png
man/figures/README-pfam_step-1.png
man/figures/README-gff_step-1.png
man/figures/README-smart_one-1.png
man/figures/README-smart_step-1.png
man/figures/README-plantcare_step-1.png
BioVizSeq documentation built on Aug. 22, 2025, 9:13 a.m.