upload_fa_to_plantcare: upload_fa_to_plantcare
In BioVizSeq: Visualizing the Elements Within Bio-Sequences
View source: R/plantcare_plot.R
upload_fa_to_plantcare R Documentation
upload_fa_to_plantcare
Description
Upload the promoter file to Plantcare database
Usage
upload_fa_to_plantcare(fasta_file, email)
Arguments
fasta_file
The path of promoter file.
email
e-mail address.
Details
Due to the file size limitation of plantcare on fasta,
upload_fa_to_plantcare() first splits fasta file.
Then uploads the splited fasta files to the plantcare database,
and automatically returns the results to the email provided by the user.
upload_fa_to_plantcare("the path/test.fasta", "your e-mail address")
Value
plantcare_result
Author(s)
Shiqi Zhao
BioVizSeq documentation built on Aug. 22, 2025, 9:13 a.m.
R Package Documentation
Browse R Packages
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/plantcare_plot.R
| upload_fa_to_plantcare | R Documentation |
upload_fa_to_plantcare
Description
Upload the promoter file to Plantcare database
Usage
upload_fa_to_plantcare(fasta_file, email)
Arguments
fasta_file |
The path of promoter file. |
email |
e-mail address. |
Details
Due to the file size limitation of plantcare on fasta, upload_fa_to_plantcare() first splits fasta file. Then uploads the splited fasta files to the plantcare database, and automatically returns the results to the email provided by the user.
upload_fa_to_plantcare("the path/test.fasta", "your e-mail address")
Value
plantcare_result
Author(s)
Shiqi Zhao
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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