plantcare_to_loc: plantcare_to_loc
In BioVizSeq: Visualizing the Elements Within Bio-Sequences
View source: R/plantcare_plot.R
plantcare_to_loc R Documentation
plantcare_to_loc
Description
Extract the location information of cis-element from Plantcare
Usage
plantcare_to_loc(plantcare_data)
Arguments
plantcare_data
The result of plantcare_classify().
Value
data.frame
Author(s)
Shiqi Zhao
Examples
plantcare_path <- system.file("extdata", "plantCARE_output.tab", package = "BioVizSeq")
plantcare_file <- read.table(plantcare_path, header = FALSE, sep = '\t', quote="")
plantcare_data <- plantcare_classify(plantcare_file)
plantcare_loc <- plantcare_to_loc(plantcare_data)
BioVizSeq documentation built on Aug. 22, 2025, 9:13 a.m.
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View source: R/plantcare_plot.R
| plantcare_to_loc | R Documentation |
plantcare_to_loc
Description
Extract the location information of cis-element from Plantcare
Usage
plantcare_to_loc(plantcare_data)
Arguments
plantcare_data |
The result of plantcare_classify(). |
Value
data.frame
Author(s)
Shiqi Zhao
Examples
plantcare_path <- system.file("extdata", "plantCARE_output.tab", package = "BioVizSeq")
plantcare_file <- read.table(plantcare_path, header = FALSE, sep = '\t', quote="")
plantcare_data <- plantcare_classify(plantcare_file)
plantcare_loc <- plantcare_to_loc(plantcare_data)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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