API for CGNM
Cluster Gauss-Newton Method
| Global functions | |
|---|---|
| CGNM_input_test | Source code |
| CGNR_ATAx_ATb | Source code |
| CGNR_ATAx_ATb_with_reg | Source code |
| CGNR_ATAx_ATb_with_regVec | Source code |
| CGNR_ATAx_ATb_with_reg_weight | Source code |
| CGNR_ATAx_ATb_with_weight | Source code |
| Cluster_Gauss_Newton_Bootstrap_method | Man page Source code |
| Cluster_Gauss_Newton_EBE_method | Man page Source code |
| Cluster_Gauss_Newton_method | Man page Source code |
| Cluster_Gauss_Newton_method_core | Source code |
| Residual_function_def | Source code |
| Residual_matrix_function | Source code |
| acceptedApproximateMinimizers | Man page Source code |
| acceptedIndices | Man page Source code |
| acceptedIndices_binary | Man page Source code |
| acceptedMaxSSR | Man page Source code |
| bestApproximateMinimizers | Man page Source code |
| col_max | Source code |
| col_mean | Source code |
| col_median | Source code |
| col_min | Source code |
| col_normalize | Source code |
| col_quantile | Man page Source code Source code |
| col_sd | Source code |
| compare_profileLikelihood | Man page Source code |
| dot | Source code |
| elbow_index | Source code |
| main_iteration_version1 | Source code |
| main_iteration_version3 | Source code |
| main_iteration_version3_fast | Source code |
| main_iteration_version4 | Source code |
| makeInitialClusterForPLrefinment | Source code |
| makeParaDistributionPlotDataFrame | Source code |
| makeSSRsurfaceDataset | Source code |
| make_ShinyCGNM_doseData | Man page Source code |
| make_ShinyCGNM_observationData | Man page Source code |
| matlabMedian | Source code |
| matlabRand | Source code |
| matlabSum | Source code |
| optimal_kmeans | Source code |
| plot_2DprofileLikelihood | Man page Source code |
| plot_Rank_SSR | Man page Source code |
| plot_SSR_parameterValue | Man page Source code |
| plot_SSRsurface | Man page Source code |
| plot_goodnessOfFit | Man page Source code |
| plot_paraDistribution_byHistogram | Man page Source code |
| plot_paraDistribution_byViolinPlots | Man page Source code |
| plot_parameterValue_scatterPlots | Man page Source code |
| plot_profileLikelihood | Man page Source code |
| plot_simulationMatrixWithCI | Man page Source code |
| plot_simulationWithCI | Man page Source code |
| prepSSRsurfaceData | Source code |
| repmat | Source code |
| shinyCGNM | Man page Source code |
| suggestInitialLowerRange | Man page Source code |
| suggestInitialUpperRange | Man page Source code |
| table_parameterSummary | Man page Source code |
| table_profileLikelihoodConfidenceInterval | Man page Source code |
| topIndices | Man page Source code |
| tryCatch_nonlinearFunction | Source code |
