plot_Rank_SSR: plot_Rank_SSR

In CGNM: Cluster Gauss-Newton Method

plot_Rank_SSR

Description

Make SSR v.s. rank plot. This plot is often used to visualize the maximum accepted SSR.

Usage

plot_Rank_SSR(CGNM_result, indicesToInclude = NA)

Arguments

CGNM_result	(required input) A list stores the computational result from Cluster_Gauss_Newton_method() function in CGNM package.
indicesToInclude	(default: NA) A vector of integers indices to include in the plot (if NA, use indices chosen by the acceptedIndices() function with default setting).

Value

A ggplot object of SSR v.s. rank.

Examples

model_analytic_function=function(x){

 observation_time=c(0.1,0.2,0.4,0.6,1,2,3,6,12)
 Dose=1000
 F=1

 ka=x[1]
 V1=x[2]
 CL_2=x[3]
 t=observation_time

 Cp=ka*F*Dose/(V1*(ka-CL_2/V1))*(exp(-CL_2/V1*t)-exp(-ka*t))

 log10(Cp)
}

observation=log10(c(4.91, 8.65, 12.4, 18.7, 24.3, 24.5, 18.4, 4.66, 0.238))

CGNM_result=Cluster_Gauss_Newton_method(
nonlinearFunction=model_analytic_function,
targetVector = observation,
initial_lowerRange = c(0.1,0.1,0.1), initial_upperRange =  c(10,10,10),
num_iter = 10, num_minimizersToFind = 100, saveLog = FALSE)

plot_Rank_SSR(CGNM_result)

CGNM documentation built on May 31, 2023, 5:57 p.m.