cor2cov: Correlation Matrix to Covariance Matrix Conversion

In CatDyn: Fishery Stock Assessment by Catch Dynamics Models

Description

Function to convert a correlation matrix to a covariance matrix.

Usage

cor2cov(cor.mat, sd, discrepancy = 1e-05)

Arguments

cor.mat	The correlation matrix to be converted.
sd	A vector that contains the standard deviations of the variables in the correlation matrix.
discrepancy	A neighborhood of 1, such that numbers on the main diagonal of the correlation matrix will be considered as equal to 1 if they fall in this neighborhood

Details

This function was copied from package MBESS.

The correlation matrix to convert can be either symmetric or triangular. The covariance matrix returned is always a symmetric matrix.

Note

The correlation matrix input should be a square matrix, and the length of sd should be equal to the number of variables in the correlation matrix (i.e., the number of rows/columns). Sometimes the correlation matrix input may not have exactly 1s on the main diagonal, due to, eg, rounding; discrepancy specifies the allowable discrepancy so that the function still considers the input as a correlation matrix and can proceed (but the function does not change the numbers on the main diagonal).

Author(s)

Ken Kelley (University of Notre Dame; [e-mail]), Keke Lai

CatDyn documentation built on May 2, 2019, 4:21 a.m.