API for CePa
Centrality-Based Pathway Enrichment

Global functions
CePa-package Man page
PID.db Man page
arrow.coor Source code
centrality Source code
cepa Man page Source code
cepa.all Man page Source code
cepa.all.parallel Man page Source code
cepa.all.parallel.by.snow Source code
cepa.ora Man page Source code
cepa.ora.all Man page Source code
cepa.univariate Man page Source code
cepa.univariate.all Man page Source code
combine.cepa.all Source code
control Source code
divide Source code
factor Source code
find.nlevelFun Source code
find.plevelFun Source code
find_code Source code
gene.list Man page
generate.pathway Man page Source code
get.cepa Man page Source code
get_color Source code
is.gsa Source code
is.ora Source code
jitt Source code
node.score Source code
nodeLevelFun.tvalue Source code
nodeLevelFun.tvalue_abs Source code
nodeLevelFun.tvalue_sq Source code
p.heatmap Source code
p.table Man page Source code
pathway.nodes Man page Source code
pathwayLevelFun.max Source code
pathwayLevelFun.mean Source code
pathwayLevelFun.median Source code
pathwayLevelFun.min Source code
pathwayLevelFun.rank Source code
pathwayLevelFun.sum Source code
permutate Source code
plot.cepa Man page Source code
plot.cepa.all Man page Source code
plot.igraph2 Source code
plot.pathway.catalogue Man page Source code
plotByRGraphviz Source code
plotGraph Man page Source code
plotNull Man page Source code
print.cepa Man page Source code
print.cepa.all Man page Source code
print.pathway.catalogue Man page Source code
radiality Man page Source code
reach Man page Source code
read.cls Man page Source code
read.gct Man page Source code
reedge Source code
report Man page Source code
sampleLabel Man page Source code
set.pathway.catalogue Man page Source code
spread Man page Source code
table.content Source code
table.head Source code
template Source code
treatment Source code
CePa documentation built on June 5, 2018, 1:03 a.m.