generate.pathway: Generate igraph object from edge list
In CePa: Centrality-Based Pathway Enrichment
generate.pathway R Documentation
Generate igraph object from edge list
Description
Generate igraph object from edge list
Usage
generate.pathway(el)
Arguments
el
edge list, matrix with two columns. The first column is the input node and the second column is the output node.
Details
The function is a wrapper of graph.edgelist and it generates
a directed graph.
In the function, repeated edged for two nodes will be eliminated.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
See Also
cepa, graph.edgelist
Examples
edgelist = rbind(c("a", "b"), c("a", "b"), c("a", "c"))
g = generate.pathway(edgelist)
CePa documentation built on Oct. 8, 2024, 5:08 p.m.
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| generate.pathway | R Documentation |
Generate igraph object from edge list
Description
Generate igraph object from edge list
Usage
generate.pathway(el)
Arguments
el |
edge list, matrix with two columns. The first column is the input node and the second column is the output node. |
Details
The function is a wrapper of graph.edgelist and it generates
a directed graph.
In the function, repeated edged for two nodes will be eliminated.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
See Also
cepa, graph.edgelist
Examples
edgelist = rbind(c("a", "b"), c("a", "b"), c("a", "c"))
g = generate.pathway(edgelist)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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