| ClusTCR | Creates ClusTCR matrix This function identifies similar CDR3... |
| ClusTCR_Large | Creates ClusTCR matrix This function identifies similar CDR3... |
| ggnet2 | Copied code from ggnet's ggnet2 function |
| mcl_cluster | Create the files for labeling the linked clusters from... |
| mcl_cluster_large | Create the files for labeling the linked clusters from... |
| Motif_from_cluster_file | Code for plotting the Motif based on a specific CDR3 length... |
| motif_plot | Code for plotting the Motif based on a specific CDR3 length... |
| motif_plot_large | Code for plotting the Motif based on a specific CDR3 length... |
| netplot_ClusTCR2 | Code for displaying the network. |
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