getDrugIngredientCodes: Get descendant codes for drug ingredients

In CodelistGenerator: Identify Relevant Clinical Codes and Evaluate Their Use

Get descendant codes for drug ingredients

Description

Get descendant codes for drug ingredients

Usage

getDrugIngredientCodes(
  cdm,
  name = NULL,
  nameStyle = "{concept_code}_{concept_name}",
  doseForm = NULL,
  doseUnit = NULL,
  routeCategory = NULL,
  ingredientRange = c(1, Inf),
  type = "codelist"
)

Arguments

cdm	cdm_reference via CDMConnector
name	Names of ingredients of interest. For example, c("acetaminophen", "codeine"), would result in a list of length two with the descendant concepts for these two particular drug ingredients.
nameStyle	Name style to apply to returned list. Can be one of "{concept_code}_{concept_name}", "{concept_code}", or "{concept_name}".
doseForm	Only descendants codes with the specified dose form will be returned. If NULL, descendant codes will be returned regardless of dose form.
doseUnit	Only descendants codes with the specified dose unit will be returned. If NULL, descendant codes will be returned regardless of dose unit
routeCategory	Only descendants codes with the specified route will be returned. If NULL, descendant codes will be returned regardless of route category.
ingredientRange	Used to restrict descendant codes to those associated with a specific number of ingredients. Must be a vector of length two with the first element the minimum number of ingredients allowed and the second the maximum. A value of c(2, 2) would restrict to only concepts associated with two ingredients.
type	Can be "codelist", "codelist_with_details", or "concept_set_expression"

Value

Concepts with their format based on the type argument.

Examples

cdm <- mockVocabRef()
getDrugIngredientCodes(cdm = cdm, name = "Adalimumab",
                       nameStyle = "{concept_name}")

CodelistGenerator documentation built on Oct. 17, 2024, 5:09 p.m.