Description Usage Arguments Value Functions Author(s)
Plots the results of the analyses of the Congreve & Lamsdell (2016) datasets.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 | clPlotQuartets(dataset, tree, cex = 1.1, pch = 2,
col = CongreveLamsdell2016::clColours, ...)
clPlotAverageQuartets(dataset, cex = 1.1, pch = 2,
col = CongreveLamsdell2016::clColours, ...)
clPlotTheseAverageQuartets(dataset, cex = 1.1, pch = 2,
col = "black", ...)
clPlotSplits(dataset, tree, cex = 1.1, pch = 2,
col = CongreveLamsdell2016::clColours, ...)
clPlotTheseAverageSplits(dataset, cex = 1.1, pch = 2, col = "black",
...)
clPlotTheseBestAverageSplits(dataset, cex = 1.1, pch = 2,
col = "black", ...)
clPlotAverageSplits(dataset, cex = 1.1, pch = 2,
col = CongreveLamsdell2016::clColours, ...)
clPlotBestAverageSplits(dataset, cex = 1.1, pch = 2,
col = CongreveLamsdell2016::clColours, ...)
|
dataset |
Dataset to plot, for example |
tree |
Integer specifying which tree to plot. |
cex, pch, ... |
Graphical parameters to pass to
|
col |
Named vector specifying colours to use to plot each analysis,
named to match |
Returns invisible.
clPlotAverageQuartets
: Plots average across all 100 trees.
clPlotTheseAverageQuartets
: Plot average for single dataset across all 100 trees.
clPlotSplits
: Splits equivalent of clPlotQuartets
.
clPlotTheseAverageSplits
: Splits equivalent of clPlotTheseAverageQuartets
.
clPlotTheseBestAverageSplits
: Splits equivalent of clPlotTheseBestAverageQuartets
.
clPlotAverageSplits
: Splits equivalent of clPlotAverageQuartets
.
clPlotBestAverageSplits
: Splits equivalent of clPlotAverageQuartets
.
Martin R. Smith
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