Sample.data: Sample data from 'CpGassoc'

In CpGassoc: Association Between Methylation and a Phenotype of Interest

Sample data from CpGassoc

Description

samplecpg

Matrix containing sample (fake) methylation data for 258 individuals over 1228 CpG sites

samplepheno

Matrix with phenotype info for the 258 individuals

annotation

Matrix with annotation information for the 1228 CpG sites

Usage

data(samplecpg)

Format

samplecpg

Matrix, dimensions 1228 x 258

samplepheno

Matrix, dimensions 258 x 6. Phenotype info on "Dose", "SBP", "Distance", "weight", "Disease", and "chip"

annotation

Matrix, dimensions 1228 x 3. Header names are "TargetID", "CHR", and "MAPINFO"

See Also

cpg.perm cpg.assoc scatterplot manhattan plot.cpg.perm

Examples

##See help pages for other functions for usage of these datasets

CpGassoc documentation built on Sept. 11, 2024, 5:17 p.m.