CrypticIBDcheck: Identifying cryptic relatedness in genetic association studies

Exploratory tools to identify closely related subjects using autosomal genetic marker data.

AuthorAnnick Joelle Nembot-Simo, Jinko Graham and Brad McNeney
Date of publication2013-09-21 08:05:29
MaintainerBrad McNeney <mcneney@sfu.ca>
LicenseGPL-3
Version0.3-1

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Files in this package

CrypticIBDcheck
CrypticIBDcheck/inst
CrypticIBDcheck/inst/CITATION
CrypticIBDcheck/inst/scripts
CrypticIBDcheck/inst/scripts/thin.R
CrypticIBDcheck/inst/doc
CrypticIBDcheck/inst/doc/IBDcheck-hapmap.pdf
CrypticIBDcheck/inst/doc/CrypticIBDcheck.Rnw
CrypticIBDcheck/inst/doc/IBDcheck-hapmap.Rnw
CrypticIBDcheck/inst/doc/IBDcheck-hapmap.R
CrypticIBDcheck/inst/doc/CrypticIBDcheck.pdf
CrypticIBDcheck/src
CrypticIBDcheck/src/IBDestp.c
CrypticIBDcheck/src/countIBS.c
CrypticIBDcheck/src/IBDestp.h
CrypticIBDcheck/src/IBDest.study.c
CrypticIBDcheck/src/IBDest.sim.c
CrypticIBDcheck/NAMESPACE
CrypticIBDcheck/data
CrypticIBDcheck/data/Nhlsim.RData
CrypticIBDcheck/data/RutgersMapB36.RData
CrypticIBDcheck/R
CrypticIBDcheck/R/filters.R CrypticIBDcheck/R/snpinfos.R CrypticIBDcheck/R/IBDcheck.R CrypticIBDcheck/R/IBD-class.R CrypticIBDcheck/R/countIBS.R CrypticIBDcheck/R/simIBD.R CrypticIBDcheck/R/estIBD.R CrypticIBDcheck/R/SNPgenmap.R CrypticIBDcheck/R/cdlIBS.R CrypticIBDcheck/R/plotIBD.R CrypticIBDcheck/R/zzz.R
CrypticIBDcheck/vignettes
CrypticIBDcheck/vignettes/IBDcheck-hapmap.bib
CrypticIBDcheck/vignettes/CrypticIBDcheck.Rnw
CrypticIBDcheck/vignettes/fig005_all.pdf
CrypticIBDcheck/vignettes/IBDcheck-hapmap.Rnw
CrypticIBDcheck/vignettes/fig005_hs.pdf
CrypticIBDcheck/vignettes/fig005_MZ.pdf
CrypticIBDcheck/vignettes/fig005_co.pdf
CrypticIBDcheck/vignettes/fig005_fs.pdf
CrypticIBDcheck/vignettes/fig005_po.pdf
CrypticIBDcheck/MD5
CrypticIBDcheck/build
CrypticIBDcheck/build/vignette.rds
CrypticIBDcheck/DESCRIPTION
CrypticIBDcheck/man
CrypticIBDcheck/man/countIBS.Rd CrypticIBDcheck/man/IBDcheck.Rd CrypticIBDcheck/man/new.IBD.Rd CrypticIBDcheck/man/plot.IBD.Rd CrypticIBDcheck/man/filter.control.Rd CrypticIBDcheck/man/SNPgenmap.Rd CrypticIBDcheck/man/sim.control.Rd CrypticIBDcheck/man/IBD.Rd CrypticIBDcheck/man/Nhlsim.Rd CrypticIBDcheck/man/RutgersMapB36.Rd CrypticIBDcheck/man/CrypticIBDcheck-package.Rd

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