CrypticIBDcheck: Identifying cryptic relatedness in genetic association studies

Exploratory tools to identify closely related subjects using autosomal genetic marker data.

Install the latest version of this package by entering the following in R:
install.packages("CrypticIBDcheck")
AuthorAnnick Joelle Nembot-Simo, Jinko Graham and Brad McNeney
Date of publication2013-09-21 08:05:29
MaintainerBrad McNeney <mcneney@sfu.ca>
LicenseGPL-3
Version0.3-1

View on CRAN

Files

inst
inst/CITATION
inst/scripts
inst/scripts/thin.R
inst/doc
inst/doc/IBDcheck-hapmap.pdf
inst/doc/CrypticIBDcheck.Rnw
inst/doc/IBDcheck-hapmap.Rnw
inst/doc/IBDcheck-hapmap.R
inst/doc/CrypticIBDcheck.pdf
src
src/IBDestp.c
src/countIBS.c
src/IBDestp.h
src/IBDest.study.c
src/IBDest.sim.c
NAMESPACE
data
data/Nhlsim.RData
data/RutgersMapB36.RData
R
R/filters.R R/snpinfos.R R/IBDcheck.R R/IBD-class.R R/countIBS.R R/simIBD.R R/estIBD.R R/SNPgenmap.R R/cdlIBS.R R/plotIBD.R R/zzz.R
vignettes
vignettes/IBDcheck-hapmap.bib
vignettes/CrypticIBDcheck.Rnw
vignettes/fig005_all.pdf
vignettes/IBDcheck-hapmap.Rnw
vignettes/fig005_hs.pdf
vignettes/fig005_MZ.pdf
vignettes/fig005_co.pdf
vignettes/fig005_fs.pdf
vignettes/fig005_po.pdf
MD5
build
build/vignette.rds
DESCRIPTION
man
man/countIBS.Rd man/IBDcheck.Rd man/new.IBD.Rd man/plot.IBD.Rd man/filter.control.Rd man/SNPgenmap.Rd man/sim.control.Rd man/IBD.Rd man/Nhlsim.Rd man/RutgersMapB36.Rd man/CrypticIBDcheck-package.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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