CytobankAPI
Cytobank API Wrapper for R

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Source code
36
Man pages
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CytobankAPI: Cytobank API Wrapper for R
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API for CytobankAPI
Cytobank API Wrapper for R

Global functions
.onAttach Source code
AdvancedAnalysis-class Man page
CITRUS-class Man page
CytobankAPI_news Man page Source code
DimensionalityReduction-class Man page
FlowSOM-class Man page
PeacoQC-class Man page
SPADE-class Man page
UMAP-class Man page
UserSession-class Man page
add_file_population_statistics Source code
add_generic_id_name Source code
add_skipped_columns Source code
array_extension_builder Source code
attachments Man page
attachments.delete Man page
attachments.delete,UserSession-method Man page
attachments.download Man page
attachments.download,UserSession-method Man page
attachments.download_zip Man page
attachments.download_zip,UserSession-method Man page
attachments.list Man page
attachments.list,UserSession-method Man page
attachments.show Man page
attachments.show,UserSession-method Man page
attachments.update Man page
attachments.update,UserSession-method Man page
attachments.upload Man page
attachments.upload,UserSession-method Man page
authenticate Man page Source code
authentication Man page
authentication.logout Man page
authentication.logout,UserSession-method Man page
authentication.revoke_all_tokens Man page
authentication.revoke_all_tokens,UserSession-method Man page
authentication.revoke_all_tokens_user Man page
authentication.revoke_all_tokens_user,UserSession-method Man page
autogating Man page
autogating.copy_autogating_analysis_settings Man page
autogating.copy_autogating_analysis_settings,UserSession-method Man page
autogating.create_autogating_analysis Man page
autogating.create_autogating_analysis,UserSession-method Man page
autogating.delete_autogating_analysis Man page
autogating.delete_autogating_analysis,UserSession-method Man page
autogating.list_autogating_analyses_of_type Man page
autogating.list_autogating_analyses_of_type,UserSession-method Man page
autogating.rename_autogating_analysis Man page
autogating.rename_autogating_analysis,UserSession-method Man page
autogating.run_autogating_analysis Man page
autogating.run_autogating_analysis,UserSession-method Man page
autogating.show_autogating_analysis_details Man page
autogating.show_autogating_analysis_details,UserSession-method Man page
autogating.show_autogating_analysis_status Man page
autogating.show_autogating_analysis_status,UserSession-method Man page
autogating.update_autogating_inference_analysis_details Man page
autogating.update_autogating_inference_analysis_details,UserSess Man page
autogating.update_autogating_training_analysis_details Man page
autogating.update_autogating_training_analysis_details,UserSessi Man page
build_compensation Source code
build_compensation_list Source code
build_fi_compensation Source code
build_gate Source code
build_gate_list Source code
build_id_name_item Source code
build_panel Source code
build_panel_list Source code
build_population Source code
build_population_list Source code
check_file Source code
check_file_status Source code
check_gates_applied Source code
citrus Man page
citrus.copy_settings Man page
citrus.copy_settings,UserSession,CITRUS-method Man page
citrus.delete Man page
citrus.delete,UserSession,CITRUS-method Man page
citrus.download Man page
citrus.download,UserSession,CITRUS-method Man page
citrus.list Man page
citrus.list,UserSession-method Man page
citrus.new Man page
citrus.new,UserSession-method Man page
citrus.rename Man page
citrus.rename,UserSession,CITRUS-method Man page
citrus.run Man page
citrus.run,UserSession,CITRUS-method Man page
citrus.show Man page
citrus.show,UserSession-method Man page
citrus.status Man page
citrus.status,UserSession,CITRUS-method Man page
citrus.update Man page
citrus.update,UserSession,CITRUS-method Man page
compensation_to_dataframe Source code
compensations Man page
compensations.list Man page
compensations.list,UserSession-method Man page
compensations.show Man page
compensations.show,UserSession-method Man page
compensations.upload_csv Man page
compensations.upload_csv,UserSession-method Man page
create_citrus_object Source code
create_dimensionality_reduction_object Source code
create_file_grouping Source code
create_flowsom_object Source code
create_fold_change_groups Source code
create_peacoqc_object Source code
create_population_selections Source code Source code
create_spade_object Source code
create_statistics_dataframe Source code
create_visne_object Source code
cyto_dataframe Source code
determine_file_type Source code
dimensionality_reduction Man page
dimensionality_reduction.copy_settings Man page
dimensionality_reduction.copy_settings,UserSession,Dimensionalit Man page
dimensionality_reduction.delete Man page
dimensionality_reduction.delete,UserSession,DimensionalityReduct Man page
dimensionality_reduction.list Man page
dimensionality_reduction.list,UserSession-method Man page
dimensionality_reduction.new Man page
dimensionality_reduction.new,UserSession-method Man page
dimensionality_reduction.rename Man page
dimensionality_reduction.rename,UserSession,DimensionalityReduct Man page
dimensionality_reduction.run Man page
dimensionality_reduction.run,UserSession,DimensionalityReduction Man page
dimensionality_reduction.show Man page
dimensionality_reduction.show,UserSession-method Man page
dimensionality_reduction.status Man page
dimensionality_reduction.status,UserSession,DimensionalityReduct Man page
dimensionality_reduction.update Man page
dimensionality_reduction.update,UserSession,DimensionalityReduct Man page
directory_file_join Source code
drop Man page
drop.upload Man page
drop.upload,UserSession-method Man page
error_parse Source code
experiments Man page
experiments.clone_full Man page
experiments.clone_full,UserSession-method Man page
experiments.clone_selective Man page
experiments.clone_selective,UserSession-method Man page
experiments.delete Man page
experiments.delete,UserSession-method Man page
experiments.full_access_users_add Man page
experiments.full_access_users_add,UserSession-method Man page
experiments.full_access_users_list Man page
experiments.full_access_users_list,UserSession-method Man page
experiments.full_access_users_remove Man page
experiments.full_access_users_remove,UserSession-method Man page
experiments.list Man page
experiments.list,UserSession-method Man page
experiments.new Man page
experiments.new,UserSession-method Man page
experiments.show Man page
experiments.show,UserSession-method Man page
experiments.trash Man page
experiments.trash,UserSession-method Man page
experiments.update Man page
experiments.update,UserSession-method Man page
extension_builder Source code
fcs_files Man page
fcs_files.download Man page
fcs_files.download,UserSession-method Man page
fcs_files.download_zip Man page
fcs_files.download_zip,UserSession-method Man page
fcs_files.file_internal_comp_show Man page
fcs_files.file_internal_comp_show,UserSession-method Man page
fcs_files.list Man page
fcs_files.list,UserSession-method Man page
fcs_files.show Man page
fcs_files.show,UserSession-method Man page
fcs_files.status Man page
fcs_files.status,UserSession-method Man page
fcs_files.upload Man page
fcs_files.upload,UserSession-method Man page
fcs_files.upload_zip Man page
fcs_files.upload_zip,UserSession-method Man page
file_grouping_dataframe_to_list Source code
file_upload Source code
filter_ids_names Source code
flowsom Man page
flowsom.copy_settings Man page
flowsom.copy_settings,UserSession,FlowSOM-method Man page
flowsom.delete Man page
flowsom.delete,UserSession,FlowSOM-method Man page
flowsom.download Man page
flowsom.download,UserSession,FlowSOM-method Man page
flowsom.list Man page
flowsom.list,UserSession-method Man page
flowsom.new Man page
flowsom.new,UserSession-method Man page
flowsom.rename Man page
flowsom.rename,UserSession,FlowSOM-method Man page
flowsom.run Man page
flowsom.run,UserSession,FlowSOM-method Man page
flowsom.show Man page
flowsom.show,UserSession-method Man page
flowsom.status Man page
flowsom.status,UserSession,FlowSOM-method Man page
flowsom.update Man page
flowsom.update,UserSession,FlowSOM-method Man page
fold_change_groups_dataframe_to_list Source code
format_bubbles Source code
gates Man page
gates.apply Man page
gates.apply,UserSession-method Man page
gates.gatingML_download Man page
gates.gatingML_download,UserSession-method Man page
gates.gatingML_upload Man page
gates.gatingML_upload,UserSession-method Man page
gates.list Man page
gates.list,UserSession-method Man page
gates.show Man page
gates.show,UserSession-method Man page
get_attachment_hashkey Source code
get_base_url Source code
get_experiment_version Source code
get_gate_version Source code
get_name_from_list Source code
get_specific_analysis_type Source code
get_unique_channels Source code
helper.channel_ids_from_long_names Man page Source code
helper.filter_names_to_ids_from_df Man page Source code
helper_functions Man page
is_directory Source code
news Man page
optSNE-class Man page
output_check Source code
panels Man page
panels.list Man page
panels.list,UserSession-method Man page
panels.show Man page
panels.show,UserSession-method Man page
parse Source code
peacoqc Man page
peacoqc.copy_settings Man page
peacoqc.copy_settings,UserSession,PeacoQC-method Man page
peacoqc.list Man page
peacoqc.list,UserSession-method Man page
peacoqc.new Man page
peacoqc.new,UserSession-method Man page
peacoqc.rename Man page
peacoqc.rename,UserSession,PeacoQC-method Man page
peacoqc.run Man page
peacoqc.run,UserSession,PeacoQC-method Man page
peacoqc.show Man page
peacoqc.show,UserSession-method Man page
peacoqc.status Man page
peacoqc.status,UserSession,PeacoQC-method Man page
peacoqc.update Man page
peacoqc.update,UserSession,PeacoQC-method Man page
population_selections_dataframe_to_list Source code Source code
populations Man page
populations.list Man page
populations.list,UserSession-method Man page
populations.show Man page
populations.show,UserSession-method Man page
rename_temp_file Source code
sample_tags Man page
sample_tags.download Man page
sample_tags.download,UserSession-method Man page
sample_tags.upload Man page
sample_tags.upload,UserSession-method Man page
scales Man page
scales.list Man page
scales.list,UserSession-method Man page
scales.show Man page
scales.show,UserSession-method Man page
scales.update Man page
scales.update,UserSession-method Man page
spade Man page
spade.bubbles_export Man page
spade.bubbles_export,UserSession,SPADE-method Man page
spade.bubbles_set Man page
spade.bubbles_set,UserSession,SPADE-method Man page
spade.bubbles_show Man page
spade.bubbles_show,UserSession,SPADE-method Man page
spade.copy_results Man page
spade.copy_results,UserSession,SPADE-method Man page
spade.copy_settings Man page
spade.copy_settings,UserSession,SPADE-method Man page
spade.delete Man page
spade.delete,UserSession,SPADE-method Man page
spade.download_all Man page
spade.download_all,UserSession,SPADE-method Man page
spade.download_clusters_table Man page
spade.download_clusters_table,UserSession,SPADE-method Man page
spade.download_global_boundaries_table Man page
spade.download_global_boundaries_table,UserSession,SPADE-method Man page
spade.download_gml Man page
spade.download_gml,UserSession,SPADE-method Man page
spade.download_layout_table Man page
spade.download_layout_table,UserSession,SPADE-method Man page
spade.download_statistics_tables Man page
spade.download_statistics_tables,UserSession,SPADE-method Man page
spade.list Man page
spade.list,UserSession-method Man page
spade.new Man page
spade.new,UserSession-method Man page
spade.rename Man page
spade.rename,UserSession,SPADE-method Man page
spade.run Man page
spade.run,UserSession,SPADE-method Man page
spade.show Man page
spade.show,UserSession-method Man page
spade.status Man page
spade.status,UserSession,SPADE-method Man page
spade.update Man page
spade.update,UserSession,SPADE-method Man page
statistics Man page
statistics.event_counts Man page
statistics.event_counts,UserSession-method Man page
statistics.general Man page
statistics.general,UserSession-method Man page
statistics_to_dataframe_proliferate_channel_statistics_by_col Source code
statistics_to_dataframe_proliferate_channel_statistics_by_row Source code
tSNE-class Man page
unformat_bubbles Source code
update_check Source code
users Man page
users.list Man page
users.list,UserSession-method Man page
users.show Man page
users.show,UserSession-method Man page
viSNE-class Man page
visne Man page
visne.copy_settings Man page
visne.copy_settings,UserSession,viSNE-method Man page
visne.delete Man page
visne.delete,UserSession,viSNE-method Man page
visne.helper.set_populations Man page Source code
visne.list Man page
visne.list,UserSession-method Man page
visne.new Man page
visne.new,UserSession-method Man page
visne.rename Man page
visne.rename,UserSession,viSNE-method Man page
visne.run Man page
visne.run,UserSession,viSNE-method Man page
visne.show Man page
visne.show,UserSession-method Man page
visne.status Man page
visne.status,UserSession,viSNE-method Man page
visne.update Man page
visne.update,UserSession,viSNE-method Man page
CytobankAPI documentation built on April 21, 2023, 9:08 a.m.

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