Man pages for CytobankAPIstats
Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'

analyzedataReturns a matrix of event counts or raw medians, as specified...
asinnormComputes the arcsinh ratio of a matrix in relation to the...
calcpereventCalculates percentages of of cell types of interest out of...
filterfilesFilters a list of fcs files by search terms
get1statusFilters matrix based on single sample name condition
get2statusFilters matrix columns based on two conditions per file, e.g....
getfcsfilesGets fcs ID numbers and sample names from a given experiment
getmarkersGets appropriate marker IDs for channels of interest
getnewindRearranges signaling results matrix with rows in the desired...
getpopsGets appropriate gate set IDs for populations of interest
getrawsignalsComputes the untransformed medians for cellular markers in...
parseeventsModifies the list obtained from a call to statistics.events...
parsestatsTakes the results of a call to statistics.general and returns...
parsestatsmeanTakes the results of a call to statistics.general and returns...
percenteventCalculates the percentage of cell populations given an...
CytobankAPIstats documentation built on Sept. 2, 2017, 1:05 a.m.