getpops: Gets appropriate gate set IDs for populations of interest

In CytobankAPIstats: Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'

Description

Gets appropriate gate set IDs for populations of interest

Usage

getpops(popsofinterest, exptno, cyto_session)

Arguments

popsofinterest	- Names of gates of interest in Cytobank as list of strings
exptno	- Integer representing an experiment ID on Cytobank account
cyto_session	- API authentication token for session

Value

Returns a list of gateSetIDs for populations of interest with names of populations as names of list

Examples

library(CytobankAPI)
popsofinterest<-c("CD4 T cells","NK cells")
cyto_session <- authenticate(site="premium", username="myusername", password="mypassword")
exptno<-2
getpops(popsofinterest,exptno,cyto_session)

CytobankAPIstats documentation built on May 2, 2019, 8:27 a.m.