simdurbin: Gene intensities simulator
In DDHFm: Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
simdurbin R Documentation
Gene intensities simulator
Description
Simulates gene intensities from the two components model as in
the papers of Durbin and Rocke.
Usage
simdurbin(n, alpha, mu, seta, seps)
Arguments
n
number of intensities to be simulated
alpha
background mean of gene intensities
mu
the means where the gene intensities are simulated from
seta
standard deviation of high-level gene intensities
seps
standard deviation of low-level gene intensities
Details
This function generates n intensities from the
Durbin and Rocke (2001) gene intensity model with parameters
alpha, seta and seps.
Value
A vector of the appropriate intensities.
Author(s)
Guy Nason <g.p.nason@bris.ac.uk>
References
Rocke, D.M. and Durbin, B.P. (2001), A model for measurement error for gene expression arrays, Journal of
Computational Biology, 8, 557-569
See Also
simdurbin2
DDHFm documentation built on Nov. 26, 2022, 1:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| simdurbin | R Documentation |
Gene intensities simulator
Description
Simulates gene intensities from the two components model as in the papers of Durbin and Rocke.
Usage
simdurbin(n, alpha, mu, seta, seps)
Arguments
n |
number of intensities to be simulated |
alpha |
background mean of gene intensities |
mu |
the means where the gene intensities are simulated from |
seta |
standard deviation of high-level gene intensities |
seps |
standard deviation of low-level gene intensities |
Details
This function generates n intensities from the
Durbin and Rocke (2001) gene intensity model with parameters
alpha, seta and seps.
Value
A vector of the appropriate intensities.
Author(s)
Guy Nason <g.p.nason@bris.ac.uk>
References
Rocke, D.M. and Durbin, B.P. (2001), A model for measurement error for gene expression arrays, Journal of Computational Biology, 8, 557-569
See Also
simdurbin2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.