| AvC | Average Catch |
| AvC_MLL | Average Catch with a size limit |
| BK | Beddington and Kirkwood life-history MP |
| CC | Age-based Catch Curve |
| CC1 | Geromont and Butterworth (2015) Constant Catch |
| CompSRA | Age-Composition Stock-Reduction Analysis |
| CompSRA_ | Internal function for CompSRA MP |
| curE | Fishing at current effort levels |
| DBSRA | Depletion-Based Stock Reduction Analysis |
| DBSRA_ | Depletion-based SRA internal function |
| DBSRAopt | Internal optimization function |
| DCAC | Depletion Corrected Average Catch |
| DCAC_ | Depletion Corrected Average Catch |
| DD | Delay - Difference Stock Assessment |
| DD_ | Delay-Difference Internal Function |
| DDe | Effort-based Delay - Difference Stock Assessment |
| DD_R | Delay-Difference Internal Function |
| demographic2 | Internal demographic function |
| DLMtool-package | DLMtool: Data-Limited Methods Toolkit |
| DTe40 | Effort searching MP aiming for a fixed stock depletion |
| DynF | Dynamic Fratio MP |
| EtargetLopt | Effort Target Optimum Length |
| Fadapt | Adaptive Fratio |
| Fdem | Demographic FMSY method |
| Fdem_ | Internal function for Fdem MP |
| FilterSmooth | Kalman filter and Rauch-Tung-Striebel smoother |
| Fratio | FMSY/M ratio methods |
| Fratio_ | Fratio internal function |
| GB_CC | Geromont and Butterworth Constant Catch Harvest Control Rule |
| GB_slope | Geromont and Butterworth index slope Harvest Control Rule |
| GB_target | Geromont and Butterworth target CPUE and catch MP |
| Gcontrol | G-control MP |
| getr | Internal function to estimate r |
| ICI | Index Confidence Interval |
| Iratio | Mean Index Ratio |
| Islope_ | Index Slope Internal Function |
| Islope1 | Index Slope Tracking MP |
| IT_ | Index Target Internal Function |
| IT5 | Iterative Index Target MP |
| Itarget_ | Incremental Index Target MP Internal Function |
| Itarget1 | Incremental Index Target MP |
| Itarget1_MPA | Itarget1 with an MPA |
| ItargetE1 | Incremental Index Target MP - Effort-Based |
| Itargeteff_ | Incremental Index Target MP Internal Function - Effort MP |
| ITe5 | Index Target Effort-Based |
| ITM | Index Target based on natural mortality rate |
| iVB | Inverse von Bertalanffy |
| LBSPR | Length-Based SPR MPs |
| LBSPR_ | Internal Estimation Function for LBSPR MP |
| Lratio_BHI | Mean length-based indicator MP of Jardim et al. 2015 |
| LstepCC1 | Step-wise Constant Catch |
| LstepCE1 | Step-wise Constant Effort |
| Ltarget1 | Length Target TAC MP |
| LtargetE1 | Length Target TAE MP |
| matlenlim | Size limit management procedures |
| MCD | Mean Catch Depletion |
| MRreal | Spatial closure and allocation management procedures |
| Rcontrol | Intrinsic rate of Increase MP |
| SBT1 | SBT simple MP |
| SPmod | Surplus production based catch-limit modifier |
| SPMSY | Catch trend Surplus Production MSY MP |
| SPslope | Slope in surplus production MP |
| SPSRA | Surplus Production Stock Reduction Analysis |
| SPSRA_ | Surplus Production Stock Reduction Analysis Internal Function |
| YPR | Yield Per Recruit analysis to get FMSY proxy F01 |
| YPR_ | Internal function for YPR MPs |
