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inst/tinytest/test_header_to_fwf_position_CUL.R
In DSSAT: A Comprehensive R Interface for the DSSAT Cropping Systems Model
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP")
# "@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "P1V",# " P1V",
42, 48, "P1D",# " P1D",
48, 54, "P5",# " P5",
54, 60, "G1",# " G1",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT")
# "@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P3",# " P3",
54, 60, "P4",# " P4",
60, 66, "P5",# " P5",
66, 72, "P6",# " P6",
72, 78, "P7",# " P7",
78, 84, "P8",# " P8",
84, 90, "VREQ",# " VREQ",
90, 96, "VBASE",# " VBASE",
96, 102, "VEFF",# " VEFF",
102, 108, "PPS1",# " PPS1",
108, 114, "PPS2",# " PPS2",
114, 120, "PHINT",# " PHINT",
120, 126, "LA1S",# " LA1S",
126, 132, "LAFV",# " LAFV",
132, 138, "LAFR",# " LAFR",
138, 144, "SHWTS",# " SHWTS",
144, 150, "G#WTS",# " G#WTS",
150, 156, "GWTS" # " GWTS"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P5",# " P5",
54, 60, "G2",# " G2",
60, 66, "G3",# " G3",
66, 72, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT")
# "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "PPS1",# " PPS1",
42, 48, "B01ND",# " B01ND",
48, 54, "B12ND",# " B12ND",
54, 60, "B23ND",# " B23ND",
60, 66, "B34ND",# " B34ND",
66, 72, "B45ND",# " B45ND",
72, 78, "B56ND",# " B56ND",
78, 84, "SR#WT",# " SR#WT",
84, 90, "SRFR",# " SRFR",
90, 96, "HMPC",# " HMPC",
96, 102, "PHINT",# " PHINT",
102, 108, "LA1S",# " LA1S",
108, 114, "LAXS",# " LAXS",
114, 120, "LAXND",# " LAXND",
120, 126, "LAXN2",# " LAXN2",
126, 132, "LAFS",# " LAFS",
132, 138, "LAFND",# " LAFND",
138, 144, "SLAS",# " SLAS",
144, 150, "LLIFA",# " LLIFA",
150, 156, "LPEFR",# " LPEFR",
156, 162, "STFR" # " STFR"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR")
# "@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "B01ND",# " B01ND",
42, 48, "B12ND",# " B12ND",
48, 54, "B23ND",# " B23ND",
54, 60, "B34ND",# " B34ND",
60, 66, "BR1FX",# " BR1FX",
66, 72, "BR2FX",# " BR2FX",
72, 78, "BR3FX",# " BR3FX",
78, 84, "BR4FX",# " BR4FX",
84, 90, "LAXS",# " LAXS",
90, 96, "SLAS",# " SLAS",
96, 102, "LLIFA",# " LLIFA",
102, 108, "LPEFR",# " LPEFR",
108, 114, "LNSLP",# " LNSLP",
114, 120, "NODWT",# " NODWT",
120, 126, "NODLT" # " NODLT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR" # " PODUR"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2O",# " P2O",
48, 54, "P2R",# " P2R",
54, 60, "P5",# " P5",
60, 66, "G1",# " G1",
66, 72, "G4",# " G4",
72, 78, "PHINT",# " PHINT",
78, 84, "GT",# " GT",
84, 90, "G5" # " G5"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5")
# "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P5",# " P5",
54, 60, "G2",# " G2",
60, 66, "G3",# " G3",
66, 72, "PHINT",# " PHINT",
72, 78, "AX",# " AX",
78, 84, "ALL" # " ALL"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL")
# "@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "TC",# " TC",
42, 48, "P1",# " P1",
48, 54, "P2",# " P2",
54, 60, "P3",# " P3",
60, 66, "P4",# " P4",
66, 72, "P5",# " P5",
72, 78, "P6",# " P6",
78, 84, "P7",# " P7",
84, 90, "P8",# " P8",
90, 96, "G1",# " G1",
96, 102, "G2",# " G2",
102, 108, "G3",# " G3",
108, 114, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT ")
# "@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "G2",# " G2",
42, 48, "G3",# " G3",
48, 54, "PD",# " PD",
54, 60, "P2",# " P2",
60, 66, "TC" # " TC"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2R",# " P2R",
48, 54, "P5",# " P5",
54, 60, "P2O",# " P2O",
60, 66, "G1",# " G1",
66, 72, "G2",# " G2",
72, 78, "G3",# " G3",
78, 84, "PHINT",# " PHINT",
84, 90, "THOT",# " THOT",
90, 96, "TCLDP",# " TCLDP",
96, 102, "TCLDF" # " TCLDF"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF ")
# "@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 51, "MaxPARCE",# " MaxPARCE",
51, 66, "APFMX",# " APFMX",
66, 81, "STKPFMAX",# " STKPFMAX",
81, 96, "SUCA",# " SUCA",
96, 111, "TBFT",# " TBFT",
111, 126, "LFMAX",# " LFMAX",
126, 141, "MXLFAREA",# " MXLFAREA",
141, 156, "MXLFARNO",# " MXLFARNO",
156, 171, "PI1",# " PI1",
171, 186, "PI2",# " PI2",
186, 201, "PSWITCH",# " PSWITCH",
201, 216, "TTPLNTEM",# " TTPLNTEM",
216, 231, "TTRATNEM",# " TTRATNEM",
231, 246, "CHUPIBASE",# " CHUPIBASE",
246, 261,"TT_POPGROWTH",# " TT_POPGROWTH",
261, 276, "POPTT16",# " POPTT16",
276, 291, "TAR0",# " TAR0",
291, 306, "TDELAY",# " TDELAY",
306, 321, "LER0",# " LER0",
321, 336, "SER0",# " SER0",
336, 351, "LG_AMBASE",# " LG_AMBASE",
351, 366, "AQP_UP5" # " AQP_UP5"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5")
# "@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "LFMAX",# " LFMAX",
42, 48, "PHTMX",# " PHTMX",
48, 54, "Stalk",# " Stalk",
54, 60, "Sucro",# " Sucro",
60, 66, "Null1",# " Null1",
66, 72, "PLF1",# " PLF1",
72, 78, "PLF2",# " PLF2",
78, 84, "Gamma",# " Gamma",
84, 90, "StkB",# " StkB",
90, 96, "StkM",# " StkM",
96, 102, "Null3",# " Null3",
102, 108, "SIZLF",# " SIZLF",
108, 114, "LIsun",# " LIsun",
114, 120, "LIshd",# " LIshd",
120, 126, "Null4",# " Null4",
126, 132, "TB_1",# " TB_1",
132, 138, "TO1_1",# " TO1_1",
138, 144, "TO2_1",# " TO2_1",
144, 150, "TM_1",# " TM_1",
150, 156, "PI1",# " PI1",
156, 162, "PI2",# " PI2",
162, 168, "DTPI",# " DTPI",
168, 174, "LSFAC",# " LSFAC",
174, 180, "Null5",# " Null5",
180, 186, "LI1",# " LI1",
186, 192, "TELOM",# " TELOM",
192, 198, "TB_2",# " TB_2",
198, 204, "TO1_2",# " TO1_2",
204, 210, "TO2_2",# " TO2_2",
210, 216, "TM_2",# " TM_2",
216, 222, "Ph1P",# " Ph1P",
222, 228, "Ph1R",# " Ph1R",
228, 234, "Ph2",# " Ph2",
234, 240, "Ph3",# " Ph3",
240, 246, "Ph4",# " Ph4",
246, 252, "StHrv",# " StHrv",
252, 258, "RTNFC",# " RTNFC",
258, 264, "MinGr",# " MinGr",
264, 270, "Null7",# " Null7",
270, 276, "RE30C",# " RE30C",
276, 282, "RL30C",# " RL30C",
282, 288, "R30C2" # " R30C2"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 ")
# "@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 51, "MAXGL",# " MAXGL",
51, 66, "N_LF_STK_EM",# " N_LF_STK_EM",
66, 81, "N_LF_IT_FORM",# " N_LF_IT_FORM",
81, 96, "MAXDGL",# " MAXDGL",
96, 111, "AMAX",# " AMAX",
111, 126, "EFF",# " EFF",
126, 141, "CHUSTK",# " CHUSTK",
141, 156, "CHUPEAK",# " CHUPEAK",
156, 171, "CHUDEC",# " CHUDEC",
171, 186, "CHUMAT",# " CHUMAT",
186, 201, "POPMAT",# " POPMAT",
201, 216, "POPPEAK",# " POPPEAK",
216, 231, "TILLOCHRON",# " TILLOCHRON",
231, 246, "PHYLLOCHRON",# " PHYLLOCHRON",
246, 261, "SLA",# " SLA",
261, 276, "MLA",# " MLA",
276, 291, "PLASTOCHRON",# " PLASTOCHRON",
291, 306, "INIT_LF_AREA",# " INIT_LF_AREA",
306, 321, "MAX_INI_LA",# " MAX_INI_LA",
321, 336, "MAX_IT_DW",# " MAX_IT_DW",
336, 351,"MID_TT_IT_GRO",# " MID_TT_IT_GRO",
351, 366,"END_TT_IT_GRO",# " END_TT_IT_GRO",
366, 381,"MID_TT_LF_GRO",# " MID_TT_LF_GRO",
381, 396,"END_TT_LF_GRO" # " END_TT_LF_GRO"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P2O",# " P2O",
54, 60, "P2R",# " P2R",
60, 66, "PANTH",# " PANTH",
66, 72, "P3",# " P3",
72, 78, "P4",# " P4",
78, 84, "P5",# " P5",
84, 90, "PHINT",# " PHINT",
90, 96, "G1",# " G1",
96, 102, "G2",# " G2",
102, 108, "PBASE",# " PBASE",
108, 114, "PSAT" # " PSAT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT")
# "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "VSEN",# " VSEN",
42, 48, "PPSEN",# " PPSEN",
48, 54, "P1",# " P1",
54, 60, "P5",# " P5",
60, 66, "PHINT",# " PHINT",
66, 72, "GRNO",# " GRNO",
72, 78, "MXFIL",# " MXFIL",
78, 84, "STMMX",# " STMMX",
84, 90, "SLAP1" # " SLAP1"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P3",# " P3",
48, 54, "P4",# " P4",
54, 60, "P5",# " P5",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "G4",# " G4",
78, 84, "PHINT",# " PHINT",
84, 90, "PCINT",# " PCINT",
90, 96, "PCGRD" # " PCGRD"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P3",# " P3",
48, 54, "P4",# " P4",
54, 60, "P5",# " P5",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "G4",# " G4",
78, 84, "PHINT",# " PHINT",
84, 90, "PCINT",# " PCINT",
90, 97, "PCGRD" # " PCGRD"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD")
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# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP")
# "@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "P1V",# " P1V",
42, 48, "P1D",# " P1D",
48, 54, "P5",# " P5",
54, 60, "G1",# " G1",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# P1V P1D P5 G1 G2 G3 PHINT")
# "@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P3",# " P3",
54, 60, "P4",# " P4",
60, 66, "P5",# " P5",
66, 72, "P6",# " P6",
72, 78, "P7",# " P7",
78, 84, "P8",# " P8",
84, 90, "VREQ",# " VREQ",
90, 96, "VBASE",# " VBASE",
96, 102, "VEFF",# " VEFF",
102, 108, "PPS1",# " PPS1",
108, 114, "PPS2",# " PPS2",
114, 120, "PHINT",# " PHINT",
120, 126, "LA1S",# " LA1S",
126, 132, "LAFV",# " LAFV",
132, 138, "LAFR",# " LAFR",
138, 144, "SHWTS",# " SHWTS",
144, 150, "G#WTS",# " G#WTS",
150, 156, "GWTS" # " GWTS"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# P1 P2 P3 P4 P5 P6 P7 P8 VREQ VBASE VEFF PPS1 PPS2 PHINT LA1S LAFV LAFR SHWTS G#WTS GWTS")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P5",# " P5",
54, 60, "G2",# " G2",
60, 66, "G3",# " G3",
66, 72, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT")
# "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "PPS1",# " PPS1",
42, 48, "B01ND",# " B01ND",
48, 54, "B12ND",# " B12ND",
54, 60, "B23ND",# " B23ND",
60, 66, "B34ND",# " B34ND",
66, 72, "B45ND",# " B45ND",
72, 78, "B56ND",# " B56ND",
78, 84, "SR#WT",# " SR#WT",
84, 90, "SRFR",# " SRFR",
90, 96, "HMPC",# " HMPC",
96, 102, "PHINT",# " PHINT",
102, 108, "LA1S",# " LA1S",
108, 114, "LAXS",# " LAXS",
114, 120, "LAXND",# " LAXND",
120, 126, "LAXN2",# " LAXN2",
126, 132, "LAFS",# " LAFS",
132, 138, "LAFND",# " LAFND",
138, 144, "SLAS",# " SLAS",
144, 150, "LLIFA",# " LLIFA",
150, 156, "LPEFR",# " LPEFR",
156, 162, "STFR" # " STFR"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# PPS1 B01ND B12ND B23ND B34ND B45ND B56ND SR#WT SRFR HMPC PHINT LA1S LAXS LAXND LAXN2 LAFS LAFND SLAS LLIFA LPEFR STFR")
# "@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 25, "VAR-NAME",#"VAR-NAME........ ",
25, 29, "EXP#",# "EXP#",
29, 36, "ECO#",# " ECO#",
36, 42, "B01ND",# " B01ND",
42, 48, "B12ND",# " B12ND",
48, 54, "B23ND",# " B23ND",
54, 60, "B34ND",# " B34ND",
60, 66, "BR1FX",# " BR1FX",
66, 72, "BR2FX",# " BR2FX",
72, 78, "BR3FX",# " BR3FX",
78, 84, "BR4FX",# " BR4FX",
84, 90, "LAXS",# " LAXS",
90, 96, "SLAS",# " SLAS",
96, 102, "LLIFA",# " LLIFA",
102, 108, "LPEFR",# " LPEFR",
108, 114, "LNSLP",# " LNSLP",
114, 120, "NODWT",# " NODWT",
120, 126, "NODLT" # " NODLT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXP# ECO# B01ND B12ND B23ND B34ND BR1FX BR2FX BR3FX BR4FX LAXS SLAS LLIFA LPEFR LNSLP NODWT NODLT")
# "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR" # " PODUR"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2O",# " P2O",
48, 54, "P2R",# " P2R",
54, 60, "P5",# " P5",
60, 66, "G1",# " G1",
66, 72, "G4",# " G4",
72, 78, "PHINT",# " PHINT",
78, 84, "GT",# " GT",
84, 90, "G5" # " G5"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2O P2R P5 G1 G4 PHINT GT G5")
# "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P5",# " P5",
54, 60, "G2",# " G2",
60, 66, "G3",# " G3",
66, 72, "PHINT",# " PHINT",
72, 78, "AX",# " AX",
78, 84, "ALL" # " ALL"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# P1 P2 P5 G2 G3 PHINT AX ALL")
# "@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "TC",# " TC",
42, 48, "P1",# " P1",
48, 54, "P2",# " P2",
54, 60, "P3",# " P3",
60, 66, "P4",# " P4",
66, 72, "P5",# " P5",
72, 78, "P6",# " P6",
78, 84, "P7",# " P7",
84, 90, "P8",# " P8",
90, 96, "G1",# " G1",
96, 102, "G2",# " G2",
102, 108, "G3",# " G3",
108, 114, "PHINT" # " PHINT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# TC P1 P2 P3 P4 P5 P6 P7 P8 G1 G2 G3 PHINT ")
# "@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "G2",# " G2",
42, 48, "G3",# " G3",
48, 54, "PD",# " PD",
54, 60, "P2",# " P2",
60, 66, "TC" # " TC"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# G2 G3 PD P2 TC")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2R",# " P2R",
48, 54, "P5",# " P5",
54, 60, "P2O",# " P2O",
60, 66, "G1",# " G1",
66, 72, "G2",# " G2",
72, 78, "G3",# " G3",
78, 84, "PHINT",# " PHINT",
84, 90, "THOT",# " THOT",
90, 96, "TCLDP",# " TCLDP",
96, 102, "TCLDF" # " TCLDF"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2R P5 P2O G1 G2 G3 PHINT THOT TCLDP TCLDF ")
# "@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 51, "MaxPARCE",# " MaxPARCE",
51, 66, "APFMX",# " APFMX",
66, 81, "STKPFMAX",# " STKPFMAX",
81, 96, "SUCA",# " SUCA",
96, 111, "TBFT",# " TBFT",
111, 126, "LFMAX",# " LFMAX",
126, 141, "MXLFAREA",# " MXLFAREA",
141, 156, "MXLFARNO",# " MXLFARNO",
156, 171, "PI1",# " PI1",
171, 186, "PI2",# " PI2",
186, 201, "PSWITCH",# " PSWITCH",
201, 216, "TTPLNTEM",# " TTPLNTEM",
216, 231, "TTRATNEM",# " TTRATNEM",
231, 246, "CHUPIBASE",# " CHUPIBASE",
246, 261,"TT_POPGROWTH",# " TT_POPGROWTH",
261, 276, "POPTT16",# " POPTT16",
276, 291, "TAR0",# " TAR0",
291, 306, "TDELAY",# " TDELAY",
306, 321, "LER0",# " LER0",
321, 336, "SER0",# " SER0",
336, 351, "LG_AMBASE",# " LG_AMBASE",
351, 366, "AQP_UP5" # " AQP_UP5"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# MaxPARCE APFMX STKPFMAX SUCA TBFT LFMAX MXLFAREA MXLFARNO PI1 PI2 PSWITCH TTPLNTEM TTRATNEM CHUPIBASE TT_POPGROWTH POPTT16 TAR0 TDELAY LER0 SER0 LG_AMBASE AQP_UP5")
# "@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "LFMAX",# " LFMAX",
42, 48, "PHTMX",# " PHTMX",
48, 54, "Stalk",# " Stalk",
54, 60, "Sucro",# " Sucro",
60, 66, "Null1",# " Null1",
66, 72, "PLF1",# " PLF1",
72, 78, "PLF2",# " PLF2",
78, 84, "Gamma",# " Gamma",
84, 90, "StkB",# " StkB",
90, 96, "StkM",# " StkM",
96, 102, "Null3",# " Null3",
102, 108, "SIZLF",# " SIZLF",
108, 114, "LIsun",# " LIsun",
114, 120, "LIshd",# " LIshd",
120, 126, "Null4",# " Null4",
126, 132, "TB_1",# " TB_1",
132, 138, "TO1_1",# " TO1_1",
138, 144, "TO2_1",# " TO2_1",
144, 150, "TM_1",# " TM_1",
150, 156, "PI1",# " PI1",
156, 162, "PI2",# " PI2",
162, 168, "DTPI",# " DTPI",
168, 174, "LSFAC",# " LSFAC",
174, 180, "Null5",# " Null5",
180, 186, "LI1",# " LI1",
186, 192, "TELOM",# " TELOM",
192, 198, "TB_2",# " TB_2",
198, 204, "TO1_2",# " TO1_2",
204, 210, "TO2_2",# " TO2_2",
210, 216, "TM_2",# " TM_2",
216, 222, "Ph1P",# " Ph1P",
222, 228, "Ph1R",# " Ph1R",
228, 234, "Ph2",# " Ph2",
234, 240, "Ph3",# " Ph3",
240, 246, "Ph4",# " Ph4",
246, 252, "StHrv",# " StHrv",
252, 258, "RTNFC",# " RTNFC",
258, 264, "MinGr",# " MinGr",
264, 270, "Null7",# " Null7",
270, 276, "RE30C",# " RE30C",
276, 282, "RL30C",# " RL30C",
282, 288, "R30C2" # " R30C2"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# LFMAX PHTMX Stalk Sucro Null1 PLF1 PLF2 Gamma StkB StkM Null3 SIZLF LIsun LIshd Null4 TB_1 TO1_1 TO2_1 TM_1 PI1 PI2 DTPI LSFAC Null5 LI1 TELOM TB_2 TO1_2 TO2_2 TM_2 Ph1P Ph1R Ph2 Ph3 Ph4 StHrv RTNFC MinGr Null7 RE30C RL30C R30C2 ")
# "@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 51, "MAXGL",# " MAXGL",
51, 66, "N_LF_STK_EM",# " N_LF_STK_EM",
66, 81, "N_LF_IT_FORM",# " N_LF_IT_FORM",
81, 96, "MAXDGL",# " MAXDGL",
96, 111, "AMAX",# " AMAX",
111, 126, "EFF",# " EFF",
126, 141, "CHUSTK",# " CHUSTK",
141, 156, "CHUPEAK",# " CHUPEAK",
156, 171, "CHUDEC",# " CHUDEC",
171, 186, "CHUMAT",# " CHUMAT",
186, 201, "POPMAT",# " POPMAT",
201, 216, "POPPEAK",# " POPPEAK",
216, 231, "TILLOCHRON",# " TILLOCHRON",
231, 246, "PHYLLOCHRON",# " PHYLLOCHRON",
246, 261, "SLA",# " SLA",
261, 276, "MLA",# " MLA",
276, 291, "PLASTOCHRON",# " PLASTOCHRON",
291, 306, "INIT_LF_AREA",# " INIT_LF_AREA",
306, 321, "MAX_INI_LA",# " MAX_INI_LA",
321, 336, "MAX_IT_DW",# " MAX_IT_DW",
336, 351,"MID_TT_IT_GRO",# " MID_TT_IT_GRO",
351, 366,"END_TT_IT_GRO",# " END_TT_IT_GRO",
366, 381,"MID_TT_LF_GRO",# " MID_TT_LF_GRO",
381, 396,"END_TT_LF_GRO" # " END_TT_LF_GRO"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# MAXGL N_LF_STK_EM N_LF_IT_FORM MAXDGL AMAX EFF CHUSTK CHUPEAK CHUDEC CHUMAT POPMAT POPPEAK TILLOCHRON PHYLLOCHRON SLA MLA PLASTOCHRON INIT_LF_AREA MAX_INI_LA MAX_IT_DW MID_TT_IT_GRO END_TT_IT_GRO MID_TT_LF_GRO END_TT_LF_GRO")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P2",# " P2",
48, 54, "P2O",# " P2O",
54, 60, "P2R",# " P2R",
60, 66, "PANTH",# " PANTH",
66, 72, "P3",# " P3",
72, 78, "P4",# " P4",
78, 84, "P5",# " P5",
84, 90, "PHINT",# " PHINT",
90, 96, "G1",# " G1",
96, 102, "G2",# " G2",
102, 108, "PBASE",# " PBASE",
108, 114, "PSAT" # " PSAT"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P2 P2O P2R PANTH P3 P4 P5 PHINT G1 G2 PBASE PSAT")
# "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP "
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "CSDL",# " CSDL",
42, 48, "PPSEN",# " PPSEN",
48, 54, "EM-FL",# " EM-FL",
54, 60, "FL-SH",# " FL-SH",
60, 66, "FL-SD",# " FL-SD",
66, 72, "SD-PM",# " SD-PM",
72, 78, "FL-LF",# " FL-LF",
78, 84, "LFMAX",# " LFMAX",
84, 90, "SLAVR",# " SLAVR",
90, 96, "SIZLF",# " SIZLF",
96, 102, "XFRT",# " XFRT",
102, 108, "WTPSD",# " WTPSD",
108, 114, "SFDUR",# " SFDUR",
114, 120, "SDPDV",# " SDPDV",
120, 126, "PODUR",# " PODUR",
126, 132, "THRSH",# " THRSH",
132, 138, "SDPRO",# " SDPRO",
138, 144, "SDLIP" # " SDLIP"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# CSDL PPSEN EM-FL FL-SH FL-SD SD-PM FL-LF LFMAX SLAVR SIZLF XFRT WTPSD SFDUR SDPDV PODUR THRSH SDPRO SDLIP ")
# "@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VRNAME",#"VRNAME.......... ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "VSEN",# " VSEN",
42, 48, "PPSEN",# " PPSEN",
48, 54, "P1",# " P1",
54, 60, "P5",# " P5",
60, 66, "PHINT",# " PHINT",
66, 72, "GRNO",# " GRNO",
72, 78, "MXFIL",# " MXFIL",
78, 84, "STMMX",# " STMMX",
84, 90, "SLAP1" # " SLAP1"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VRNAME.......... EXPNO ECO# VSEN PPSEN P1 P5 PHINT GRNO MXFIL STMMX SLAP1")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P3",# " P3",
48, 54, "P4",# " P4",
54, 60, "P5",# " P5",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "G4",# " G4",
78, 84, "PHINT",# " PHINT",
84, 90, "PCINT",# " PCINT",
90, 96, "PCGRD" # " PCGRD"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD")
# "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD"
true_fwf_pos <- tibble::tribble(
~begin, ~end, ~col_names,# ~check,
0, 7, "VAR#",# "@VAR# ",
7, 24, "VAR-NAME",#"VAR-NAME........ ",
24, 29, "EXPNO",# "EXPNO",
29, 36, "ECO#",# " ECO#",
36, 42, "P1",# " P1",
42, 48, "P3",# " P3",
48, 54, "P4",# " P4",
54, 60, "P5",# " P5",
60, 66, "G2",# " G2",
66, 72, "G3",# " G3",
72, 78, "G4",# " G4",
78, 84, "PHINT",# " PHINT",
84, 90, "PCINT",# " PCINT",
90, 97, "PCGRD" # " PCGRD"
)
col_names <- c("Stalk", "Sucro", "Null1", "TB(1)", "TO1(1)", "TO2(1)", "TB(2)",
"TO1(2)", "TO2(2)", " *TM(1)", " *TM(2)", "StHrv", "RTNFAC",
"Null7", "RES30C", "RLF30C")
left_just <- c("VAR#", "VARNAME\\.*", "VAR-NAME\\.*", "VRNAME\\.*")
check_fwf_pos <- DSSAT:::header_to_fwf_position("@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD",
col_names = col_names,
left_justified = left_just)
expect_identical(check_fwf_pos, true_fwf_pos,
info = "@VAR# VAR-NAME........ EXPNO ECO# P1 P3 P4 P5 G2 G3 G4 PHINT PCINT PCGRD")
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