AraMetRoots: A metabolite data set from Arabidopsis roots by GC-TOF/MS

In DiffCorr: Analyzing and Visualizing Differential Correlation Networks in Biological Data

A metabolite data set from Arabidopsis roots by GC-TOF/MS

Description

A metabolite data set. The Arabidopsis metabolome of the roots of individual WT plants and the mto1 and tt4 mutants were analyzed by GC-TOF/MS.

Details

53 root samples (WT, n = 17; mto1 n = 16; and tt4, n = 20, biological replicates).

A matrix containing 59 metabolites (rows) and 53 observations (columns).

MetaboLights accession no.: MTBLS45

For comparisons with data from aerial parts (Kusano, Fukushima et al. 2007) we selected 59 commonly-detected metabolites in both datasets using MetMask http://metmask.sourceforge.net.

Author(s)

Atsushi Fukushima

References

Atsushi Fukushima et al. BMC Syst Biol 2011 5:1.

DiffCorr documentation built on Aug. 25, 2023, 5:16 p.m.