API for DrDimont
Drug Response Prediction from Differential Multi-Omics Networks

Global functions
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calculate_interaction_score Man page Source code
check_connection Man page Source code
check_drug_target Man page Source code
check_drug_targets_in_layers Man page Source code
check_input Man page Source code
check_layer Man page Source code
check_sensible_connections Man page Source code
chunk Man page Source code
chunk_2gether Man page Source code
combine_graphs Man page Source code
combined_graphs_example Man page
compute_correlation_matrices Man page Source code
compute_drug_response_scores Man page Source code
corPvalueStudentParallel Man page Source code
correlation_matrices_example Man page
create_unique_layer_node_ids Man page Source code
determine_drug_targets Man page Source code
differential_graph_example Man page
drdimont_settings Man page Source code
drug_gene_interactions Man page
drug_response_scores_example Man page
drug_target_edges_example Man page
find_targets Man page Source code
generate_combined_graphs Man page Source code
generate_differential_score_graph Man page Source code
generate_individual_graphs Man page Source code
generate_interaction_score_graphs Man page Source code
generate_reduced_graph Man page Source code
get_layer Man page Source code
get_layer_setting Man page Source code
graph_metrics Man page Source code
individual_graphs_example Man page
install_python_dependencies Man page Source code
inter_layer_edgelist_by_id Man page Source code
inter_layer_edgelist_by_table Man page Source code
interaction_score_graphs_example Man page
layers_example Man page
load_interaction_score_output Man page Source code
make_connection Man page Source code
make_drug_target Man page Source code
make_layer Man page Source code
metabolite_data Man page
metabolite_protein_interactions Man page
mrna_data Man page
network_reduction_by_p_value Man page Source code
network_reduction_by_pickHardThreshold Man page Source code
phosphosite_data Man page
protein_data Man page
return_errors Man page Source code
run_pipeline Man page Source code
sample_size Man page Source code
set_cluster Man page Source code
shutdown_cluster Man page Source code
target_edge_list Man page Source code
write_interaction_score_input Man page Source code
DrDimont documentation built on Sept. 23, 2022, 5:06 p.m.