metabolite_protein_interactions: Metabolite protein interaction data

In DrDimont: Drug Response Prediction from Differential Multi-Omics Networks

Metabolite protein interaction data

Description

Data frame providing interactions of metabolites and proteins. The data was taken from the STITCH Database.

Usage

metabolite_protein_interactions

Format

A data frame with 3 columns.

pubchem_id

Pubchem IDs defining interacting metabolites

gene_name

gene names defining interacting proteins

combined_score

Score describing the strength of metabolite-protein interaction

Source

STITCH DB: http://stitch.embl.de/

Pubchem IDs: https://pubchem.ncbi.nlm.nih.gov

STRING DB: https://string-db.org/

DrDimont documentation built on Sept. 23, 2022, 5:06 p.m.