return_errors: Return detected errors in the input data

In DrDimont: Drug Response Prediction from Differential Multi-Omics Networks

Return detected errors in the input data

Description

Throws an error in case errors have been passed to the function. Messages describing the detected errors are printed.

Usage

return_errors(errors)

Arguments

errors

[string] Character string vector containing error messages.

Value

No return value, writes error messages to console

Examples

data(layers_example)
data(metabolite_protein_interactions)
data(drug_gene_interactions)
data

all_layers <- layers_example

all_inter_layer_connections = list(
    make_connection(from='mrna', to='protein', connect_on='gene_name', weight=1),
    make_connection(from='protein', to='phosphosite', connect_on='gene_name', weight=1),
    make_connection(from='protein', to='metabolite',
    connect_on=metabolite_protein_interactions, weight='combined_score'))

all_drug_target_interactions <- make_drug_target(
                                    target_molecules="protein",
                                    interaction_table=drug_gene_interactions,
                                    match_on="gene_name")

return_errors(check_input(layers=all_layers,
    inter_layer_connections=all_inter_layer_connections,
    drug_target_interactions=all_drug_target_interactions))

DrDimont documentation built on Sept. 23, 2022, 5:06 p.m.