sa2params: Convert SA output to model parameter objects

In ELAplus: Energy Landscape Analysis for Ecological Communities

Convert SA output to model parameter objects

Description

Convert the output of runSA / saEndpoint into parameter objects in (extended) maximum pairwise entropy model: h, J, and optionally g when environmental parameter matrix is specified.

Usage

sa2params(sa, env = NULL)

Arguments

sa	A list in the form list(param_matrix, enmat) where param_matrix contains estimated parameters.
env	Optional numeric vector of environmental values (column names correspond to environmental factors).Default is NULL.

Value

A list with elements he (h), je (J), ge (g or NULL), and hge (combined field).

ELAplus documentation built on May 28, 2026, 5:09 p.m.