saEndpoint: Extract endpoint parameters from runSA output

In ELAplus: Energy Landscape Analysis for Ecological Communities

Extract endpoint parameters from runSA output

Description

Summarize the final parameter estimates across SA replicates by averaging the last recorded block of parameters.

Usage

saEndpoint(fittingMat, ocmat, enmat = NULL)

Arguments

fittingMat	A list of SA trajectories returned by runSA(getall = TRUE).
ocmat	Numeric matrix (0/1). Rows are samples and columns are species.
enmat	Optional environmental parameter matrix used in fitting.

Value

A numeric matrix of median endpoint parameters across serials. Rownames correspond to samples and Colnames correspond to species list

ELAplus documentation built on May 28, 2026, 5:09 p.m.