Description Usage Arguments Details Note See Also
Contour of fitted mixture density cab be an important indicator of goodness-of-fit. Together with the heatmaps, this function provides a general idea of how well the mixtue model fits to the data.
1 2 3 4 5 6 7 8 9 10 | EmSkew.flow(S, obj = NULL, distr="",diag.panel=TRUE,upper.panel="type2",
lower.panel ="type3", levels=seq(5, 95,by=20),attop=FALSE,clust=NULL,
title="",path="",plot=TRUE)
EmSkew.contours(S, obj = NULL, clust = NULL,distr="",diag.panel=TRUE,
upper.panel="type2",lower.panel="type3",levels=seq(5,95,by=20),
plot=TRUE,title="",path='',attop =FALSE)
EmSkew.filter(S, g=1,distr="mst",diag.panel=TRUE,upper.panel="type2",
lower.panel = "type3", levels = 90, attop = FALSE,
title="",path="",plot=TRUE)
|
g |
The number of components to filter the data at FSC and SSC channels. |
S |
A dataframe. |
obj |
A list including the parameters of a (skew) mixture model. |
distr |
A three letter string specifying the distribution. |
diag.panel |
A logical value, plot density. |
upper.panel |
A string for the panel to be used in upper triangle. |
lower.panel |
A string for the panel to be used in lower triangle. |
levels |
A vector of contour percentage levels for the plots. It should be in the range of 0 to 100. |
attop |
A logical value indicating the direction of diagonal panels. |
clust |
A vector with the cluster labels for each observation of the sample. |
title |
The png file name. |
path |
The path to the folder where plots are stored. |
plot |
A logical variable, whether plot it in the windows. |
R package geneplotter is required.
The input list 'obj' must be assigned a component "distr".
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