API for EasyStrata
Evaluation of stratified genome-wide association meta-analysis results

Global functions
ADDCOL Source code
ADDCOL.run Source code
ADJUSTALLELES Source code
ADJUSTALLELES.FlipStrand Source code
ADJUSTALLELES.GWADATA.valid Source code
ADJUSTALLELES.return Source code
ADJUSTALLELES.run Source code
ADJUSTALLELES.valid Source code
ANNOTATE Source code
ANNOTATE.GWADATA.valid Source code
ANNOTATE.run Source code
BONFERRONI Source code
BONFERRONI.run Source code
CALCPDIFF Source code
CALCPDIFF.run Source code
CALCPHET Source code
CALCPHET.run Source code
CALCULATE Source code
CALCULATE.run Source code
CLEAN Source code
CLEAN.run Source code
CLUMP Source code
CLUMP.GWADATA.valid Source code
CLUMP.run Source code
CRITERION Source code
CRITERION.run Source code
EASYMERGE Source code
EASYMERGE.GWADATA.valid Source code
EASYMERGE.easymerge Source code
EASYMERGE.init Source code
EASYMERGE.read Source code
EASYMERGE.read.10rows Source code
EASYMERGE.run Source code
EDITCOL Source code
EDITCOL.GWADATA.valid Source code
EDITCOL.run Source code
EVALSTAT Source code
EVALSTAT.run Source code
EXTRACTSNPS Source code
EXTRACTSNPS.GWADATA.valid Source code
EXTRACTSNPS.run Source code
EasyQC Source code
EasyStrata Man page Source code
EasyX Source code
EasyX.run Source code
EqcReader Source code
FDR Source code
FDR.run Source code
FILTER Source code
FILTER.run Source code
GC Source code
GC.GWADATA.valid Source code
GC.run Source code
GETCOLS Source code
GETCOLS.run Source code
GETNUM Source code
GETNUM.run Source code
GWADATA Source code
GWADATA.cbind Source code
GWADATA.copy Source code
GWADATA.define Source code
GWADATA.easyin Source code
GWADATA.getcol Source code
GWADATA.getcols Source code
GWADATA.getfilelistfiles Source code
GWADATA.getfiles Source code
GWADATA.getmetalscriptfiles Source code
GWADATA.getrows Source code
GWADATA.init Source code
GWADATA.merge Source code
GWADATA.read Source code
GWADATA.read.10rows Source code
GWADATA.removecols Source code
GWADATA.removerows Source code
GWADATA.renamecol Source code
GWADATA.reset Source code
GWADATA.settbl Source code
GWADATA.write Source code
INDEP Source code
INDEP.GWADATA.valid Source code
INDEP.run Source code
JOINTTEST Source code
JOINTTEST.run Source code
MERGE Source code
MERGE.GWADATA.valid Source code
MERGE.init Source code
MERGE.run Source code
MERGEEASYIN Source code
MERGEEASYIN.GWADATA.valid Source code
MERGEEASYIN.run Source code
MERGEEASYIN.start Source code
METAANALYSIS Source code
METAANALYSIS.run Source code
MHPLOT Source code
MHPLOT.GWADATA.valid Source code
MHPLOT.run Source code
MIAMIPLOT Source code
MIAMIPLOT.GWADATA.valid Source code
MIAMIPLOT.run Source code
QQPLOT Source code
QQPLOT.GWADATA.valid Source code
QQPLOT.run Source code
RCD Source code
RCD.eval Source code
RCD.eval.report Source code
REMOVECOL Source code
REMOVECOL.run Source code
RENAMECOL Source code
RENAMECOL.run Source code
REPORT Source code
REPORT.getval Source code
REPORT.newrow Source code
REPORT.resort Source code
REPORT.write Source code
RPLOT Source code
RPLOT.REPORT.valid Source code
RPLOT.run Source code
SPLOT Source code
SPLOT.GWADATA.valid Source code
SPLOT.run Source code
STRSPLITCOL Source code
STRSPLITCOL.GWADATA.valid Source code
STRSPLITCOL.run Source code
WRITE Source code
WRITE.run Source code
fnAddMultiPng Source code
fnAddPlot Source code
fnCloseMultiPng Source code
fnClosePlot Source code
fnOpenMultiPlot Source code
fnOpenMultiPng Source code
fnOpenPlot Source code
fnOpenPng.Boxplot Source code
fnOpenPng.MH Source code
fnOpenPng.Miami Source code
validADDCOL Source code
validANNOTATE Source code
validBONFERRONI Source code
validCALCPDIFF Source code
validCALCPHET Source code
validCALCULATE Source code
validCLEAN Source code
validCLUMP Source code
validCRITERION Source code
validEDITCOL Source code
validEXTRACTSNPS Source code
validFDR Source code
validFILTER Source code
validGC Source code
validGETCOLS Source code
validGETNUM Source code
validINDEP Source code
validJOINTTEST Source code
validMERGEEASYIN Source code
validMETAANALYSIS Source code
validQQPLOT Source code
validREMOVECOL Source code
validRENAMECOL Source code
validRPLOT Source code
validSPLOT Source code
validSTRSPLITCOL Source code
validWRITE Source code
EasyStrata documentation built on May 29, 2017, 7:06 p.m.