int.loc2al: INTERNAL CONVERSION TOOLS FOR GENETIC DATA

In EcoGenetics: Management and Exploratory Analysis of Spatial Data in Landscape Genetics

Description

INTERNAL CONVERSION TOOLS FOR GENETIC DATA

Usage

int.loc2al(
  X,
  ncod = NULL,
  ploidy = 2,
  sep.in = "",
  sep.out = NULL,
  chk.names = TRUE,
  chk.plocod = TRUE
)

Arguments

X	Input
ncod	Number of digits coding each allele (e.g., 1: x, 2: xx, 3: xxx, etc.). If NULL, ncod will we obtained from the ploidy and the maximum number of characters in the data cells.
ploidy	Ploidy of the data.
sep.in	Separator in the input
sep.out	Separator in the output
chk.names	Defalult TRUE. The function make checks of individuals and loci names during conversion.
chk.plocod	Defalult TRUE. The function checks coherence in ploidy and number of digits coding alleles for loci data during conversion.

EcoGenetics documentation built on July 8, 2020, 5:46 p.m.