Mantel and partial Mantel tests, internal.

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Description

Mantel and partial Mantel tests, internal.

Usage

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int.mantel(d1, d2, dc, nsim, test, alternative = "auto", plotit = FALSE,
  method = "pearson", na.omit = FALSE, ...)

Arguments

d1

distance matrix.

d2

distance matrix.

dc

conditional distance matrix (optional).

nsim

Number of Monte-Carlo simulations.

test

If test = "bootstrap", the program generates a bootstrap resampling and the associated confidence intervals. If test = "permutation" a permutation test is made and the P-values are computed.

alternative

The alternative hypothesis. If "auto" is selected (default) the program determines the alternative hypothesis. Other options are: "two.sided", "greater" and "less".

Author(s)

Leandro Roser leandroroser@ege.fcen.uba.ar

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