Description Details Author(s) References See Also
Functions to test for changes of a response to a stimulus grouping relative to a background or baseline response.
Package: | EffectsRelBaseline |
Version: | 0.4 |
Date: | 2013-06-12 |
License: | GPL version 3 or newer |
Built: | R 2.15.2; ; 2013-06-12 22:41:44 UTC; unix |
Index:
1 2 3 4 5 6 7 8 9 10 11 | ef Example data of human single neuron responses to presentation of emotional faces.
fRatioStat
F-ratio statistic for grouped responses.
LL1WayAnova
Log-likelihood ratio statistic for grouped responses.
relBackgroundLL
Log-likelihood ratio of grouped responses being drawn from
a background distribution with known mean and variance.
sumSqCat
Weighted sum of squared deviations test statistic, as used
in the changes from background test (CBT).
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This package provides functions for testing whether grouped responses have significant deviations from baseline. It allows testing using the non-parametric changes from background test (CBT), which doesn't require multiple testing relative to baseline followed by a second test for an effect of group on the responses. Such double testing can lead to erroneous conclusions, as discussed in Steinmetz & Thorp, 2013.
The primary function is sumSqCat
which computes the appropriate test statistic for use in the CBT. A variety of other test functions are provided which can
be used for comparison of performance.
Peter N. Steinmetz <PeterNSteinmetz@steinmetz.org> Christopher Thorp <thorp@spacia.org>
Maintainer: Peter N. Steinmetz <PeterNSteinmetz@steinmetz.org>
Steinmetz, P.N. & Thorp, C.K. (2013) Testing for effects of different stimuli on neuronal firing relative to background activity. Journal of Neural Engineering, Sept. 2013.
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