EpiBayes: Implements Hierarchical Bayesian Models for Epidemiological Applications
Version 0.1.2

Hierarchical Bayesian models for use in disease freedom and disease prevalence studies, designed with epidemiological applications in mind. The models themselves are in the spirit of those presented in Branscum et al. (2006) (see package documentation for full reference). The helper functions and methods were designed to make implementation and processing of the complex model output relatively simple in application.

Browse man pages Browse package API and functions Browse package files

AuthorMatthew Branan, Marta Remmenga, Lori Gustafson, Jennifer Hoeting
Date of publication2015-06-24 11:15:19
MaintainerMatthew Branan <matthew.branan@gmail.com>
LicenseGPL (>= 2)
Version0.1.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("EpiBayes")

Man pages

eb: eb Generic
ebhistorical: ebhistorical Generic
ebsamplesize: ebsamplesize Generic
ebsummary: ebsummary Generic
EpiBayesHistorical: Historical Aggregation for Disease Model
EpiBayes_ns: Disease Model without Storage
EpiBayes_s: Disease Model with Storage
EpiBayesSampleSize: Sample Size Search for EpiBayes Models
plot.eb: Plot Method for EpiBayes Output
plot.ebhistorical: Plot Method for EpiBayesHistorical Output
plot.ebhistoricalsummary: Plot Method for Summary of EpiBayes Historical Object
print.eb: Print Method for EpiBayes Object
print.ebhistorical: Print Method for EpiBayes Historical Object
print.ebhistoricalsummary: Print Method for EpiBayes Historical Object
print.ebsamplesize: Print Method for EpiBayes Sample Size Object
print.ebsummary: Print Method for EpiBayes Historical Object
summary.eb: Summary Method for EpiBayes Object
summary.ebhistorical: Summary Method for EpiBayes Historical Object
utils_mumhproposaldist: Proposal Distribution for MH Step for 'mu'
utils_mumhtargetdist: Target Distribution for MH Step for 'mu'
utils_newalphbet: Computes Beta Parameters given a Mean and Variance

Functions

EpiBayesHistorical Man page Source code
EpiBayesSampleSize Man page Source code
EpiBayes_ns Man page Source code
EpiBayes_s Man page Source code
eb Man page Source code
ebhistorical Man page Source code
ebsamplesize Man page Source code
ebsummary Man page Source code
plot.eb Man page Source code
plot.ebhistorical Man page Source code
plot.ebhistoricalsummary Man page Source code
print.eb Man page Source code
print.ebhistorical Man page Source code
print.ebhistoricalsummary Man page Source code
print.ebsamplesize Man page Source code
print.ebsummary Man page Source code
summary.eb Man page Source code
summary.ebhistorical Man page Source code
utils_mumhproposaldist Man page Source code
utils_mumhtargetdist Man page Source code
utils_newalphbet Man page Source code

Files

inst
inst/doc
inst/doc/EpiBayes2Level.Rnw
inst/doc/EpiBayesIntroduction.pdf
inst/doc/EpiBayesIntroduction.Rnw
inst/doc/EpiBayes2Level.pdf
inst/doc/EpiBayes3Level.pdf
inst/doc/EpiBayes2Level.R
inst/doc/EpiBayes3Level.Rnw
inst/doc/EpiBayes3Level.R
inst/doc/EpiBayesIntroduction.R
NAMESPACE
NEWS
R
R/utils_mumhproposaldist.R
R/utils_newalphbet.R
R/eb.R
R/print.eb.R
R/summary.ebhistorical.R
R/plot.ebhistorical.R
R/plot.eb.R
R/print.ebsamplesize.R
R/summary.eb.R
R/print.ebhistoricalsummary.R
R/plot.ebhistoricalsummary.R
R/EpiBayes_s.R
R/ebsummary.R
R/print.ebsummary.R
R/EpiBayes_ns.R
R/utils_mumhtargetdist.R
R/ebsamplesize.R
R/EpiBayesHistorical.R
R/ebhistorical.R
R/EpiBayesSampleSize.R
R/print.ebhistorical.R
vignettes
vignettes/EpiBayes2Level.Rnw
vignettes/EpiBayesIntroduction.Rnw
vignettes/EpiBayes3Level.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/ebhistorical.Rd
man/ebsummary.Rd
man/print.ebhistoricalsummary.Rd
man/EpiBayes_s.Rd
man/summary.eb.Rd
man/print.ebsamplesize.Rd
man/plot.eb.Rd
man/utils_mumhtargetdist.Rd
man/plot.ebhistorical.Rd
man/print.ebhistorical.Rd
man/ebsamplesize.Rd
man/EpiBayesHistorical.Rd
man/EpiBayes_ns.Rd
man/summary.ebhistorical.Rd
man/eb.Rd
man/print.eb.Rd
man/print.ebsummary.Rd
man/EpiBayesSampleSize.Rd
man/utils_mumhproposaldist.Rd
man/plot.ebhistoricalsummary.Rd
man/utils_newalphbet.Rd
EpiBayes documentation built on May 20, 2017, 1:49 a.m.