Description Usage Arguments Value See Also
plot.epictmcmc
is an S3 method that plots the output of an S3 object of class epictmcmc
.
1 2 3 |
x |
an S3 object of class |
epi |
epidemic data of class |
plottype |
determines which of three options to plot the output of the |
start, end, thin |
options for creating |
... |
additional arguments that are passed to the generic |
The argument plottype
is used to specify the kind of plot produced. Trace and density plots of the posterior distribution of the model parameters can be obtained by setting plottype
= “parameter”. Additionally, in the case of unobserved infection (removal) times, a plot of the average posterior and 95% percentile intervals of the inferred infection (removal) times are produced by setting plottype
= “inf.times” (“rem.times”).
epictmcmc
, print.epictmcmc
, summary.epictmcmc
, mcmc
, plot.mcmc
.
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