extract_samples: Extract all samples from a stan fit

extract_samplesR Documentation

Extract all samples from a stan fit

Description

If the object argument is a ⁠<stanfit>⁠ object, it simply returns the result of rstan::extract(). If it is a ⁠<CmdStanMCMC>⁠ it returns samples in the same format as rstan::extract() does for ⁠<stanfit>⁠ objects.

Usage

extract_samples(stan_fit, pars = NULL, include = TRUE)

Arguments

stan_fit

A ⁠<stanfit>⁠ or ⁠<CmdStanMCMC>⁠ object as returned by fit_model().

pars

Any selection of parameters to extract

include

whether the parameters specified in pars should be included (TRUE, the default) or excluded (FALSE)

Value

List of data.tables with samples


EpiNow2 documentation built on Oct. 31, 2024, 5:09 p.m.