API for EvoPhylo
Pre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics
| Global functions | |
|---|---|
| FBD_dens_plot | Man page Source code |
| FBD_normality_plot | Man page Source code |
| FBD_reshape | Man page Source code |
| FBD_summary | Man page Source code |
| FBD_tests1 | Man page Source code |
| FBD_tests2 | Man page Source code |
| RateTable_Means_1p_Clades | Man page |
| RateTable_Means_3p_Clades | Man page |
| beast2.names | Source code |
| characters | Man page |
| clock_reshape | Man page Source code |
| clockrate_dens_plot | Man page Source code |
| clockrate_reg_plot | Man page Source code |
| clockrate_summary | Man page Source code |
| cluster_to_nexus | Man page Source code |
| combine_log | Man page Source code |
| detect_posterior | Source code |
| drop.dummy.beast | Man page Source code |
| drop.dummy.mb | Man page Source code |
| firstup | Source code |
| get_clockrate_posterior | Source code |
| get_clockrate_table_BEAST2 | Man page Source code |
| get_clockrate_table_MrBayes | Man page Source code |
| get_gower_dist | Man page Source code |
| get_pwt_rates_BEAST2 | Man page Source code |
| get_pwt_rates_MrBayes | Man page Source code |
| get_sil_widths | Man page Source code |
| gowerdist | Source code |
| make_clusters | Man page Source code |
| offset.to.dummy | Man page Source code |
| offset.to.dummy.metadata | Man page Source code |
| offset.to.dummy.phylo | Source code |
| oneSummary | Source code |
| plot.cluster_df | Man page Source code |
| plot.sil_width_df | Man page Source code |
| plot_back_rates | Man page Source code |
| plot_treerates_sgn | Man page Source code |
| post_mean_reshape | Source code |
| post_se_reshape | Source code |
| post_trees | Man page |
| posterior1p | Man page |
| posterior3p | Man page |
| posterior_clockrate_reshape | Source code |
| safe_as.numeric | Source code |
| tree1p | Man page |
| tree3p | Man page |
| tree_clock1 | Man page |
| tree_clock2 | Man page |
| write.beast.treedata | Man page Source code |
| write_partitioned_alignments | Man page Source code |
