API for ExomeDepth
Calls Copy Number Variants from Targeted Sequence Data

Global functions
.onLoad Source code
AnnotateExtra Man page
AnnotateExtra,ExomeDepth-method Man page
C_hmm Man page
CallCNVs Man page
CallCNVs,ExomeDepth-method Man page
Conrad.hg19.common.CNVs Man page
ExomeCount Man page
ExomeDepth-class Man page
TestCNV Man page
TestCNV,ExomeDepth-method Man page
count.everted.reads Man page Source code
countBam.everted Man page Source code
countBamInGRanges.exomeDepth Man page
exons.hg19 Man page
exons.hg19.X Man page
genes.hg19 Man page
get.power.betabinom Man page
getBamCounts Man page Source code
get_loglike_matrix Man page
initialize,ExomeDepth-method Man page
plot,ANY-method Man page
plot,ExomeDepth,ANY-method Man page
plot,ExomeDepth-method Man page
plot-methods Man page
plot.ExomeDepth Man page
qbetabinom Man page Source code
qbetabinom.ab Man page
select.reference.set Man page Source code
somatic.CNV.call Man page Source code
viterbi.hmm Man page Source code
ExomeDepth documentation built on Jan. 9, 2020, 1:09 a.m.