ExomeCount: Example dataset for ExomeDepth

ExomeCountR Documentation

Example dataset for ExomeDepth

Description

An example dataset of 4 exome samples, chromosome 1 only.

Format

A data frame with 25592 observations on the following 9 variables:

  • chromosome, Character vector with chromosome names (only chromosome 1 in that case)

  • start, start of exons

  • end, end of exons

  • exons, character name of exons

  • camfid.032KA_sorted_unique.bam

  • camfid.033ahw_sorted_unique.bam

  • camfid.034pc_sorted_unique.bam

  • camfid.035if_sorted_unique.bam

  • GC, a numeric vector with the GC content

Source

Dataset generated in collaboration with Sergey Nejentsev, University of Cambridge.


ExomeDepth documentation built on Nov. 3, 2022, 5:05 p.m.