readfadatafile: read FA data from a csv file.
In FAMetA: Fatty Acid Metabolic Analysis
readfadatafile R Documentation
read FA data from a csv file.
Description
First rows must contain metadata information such
as sample groups (row named sampletype) and any other extra information like
protein levels for external normalization. Then, the following row must
contain a Compound and Label columns followed by all sample names.
FA names must be unique and omega series must be indicated
(i.e. FA(20:4)n3, FA(24:1)n9, FA(16:0)). Unknown FA series can be named as nx,
ny, nz to differentiate between isomers. Labels must be specified with integer
numbers for 0 to maximum number of carbons.
Usage
readfadatafile(file, sep = ",", dec = ".")
Arguments
file
csv file name.
sep
column delimiter.
dec
character used for decimal points.
Details
read FA data from a csv file.
Value
fadata.
Author(s)
M Isabel Alcoriza-Balaguer <maribel_alcoriza@iislafe.es>
Examples
## Not run:
fadata <- readfadatafile("externafadata.csv", sep=",", dec=".")
## End(Not run)
FAMetA documentation built on May 29, 2024, 8:16 a.m.
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| readfadatafile | R Documentation |
read FA data from a csv file.
Description
First rows must contain metadata information such as sample groups (row named sampletype) and any other extra information like protein levels for external normalization. Then, the following row must contain a Compound and Label columns followed by all sample names. FA names must be unique and omega series must be indicated (i.e. FA(20:4)n3, FA(24:1)n9, FA(16:0)). Unknown FA series can be named as nx, ny, nz to differentiate between isomers. Labels must be specified with integer numbers for 0 to maximum number of carbons.
Usage
readfadatafile(file, sep = ",", dec = ".")
Arguments
file |
csv file name. |
sep |
column delimiter. |
dec |
character used for decimal points. |
Details
read FA data from a csv file.
Value
fadata.
Author(s)
M Isabel Alcoriza-Balaguer <maribel_alcoriza@iislafe.es>
Examples
## Not run:
fadata <- readfadatafile("externafadata.csv", sep=",", dec=".")
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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