runSynthesisAnalysis | R Documentation |
run synthesis analysis.
runSynthesisAnalysis( fadata, toDo, R2Thr = R2Thr, maxiter = maxiter, maxconvergence = maxconvergence, D1 = D1, D2 = D2, P = P, startpoints = startpoints, parameters = FAMetA::parameters, verbose = TRUE )
fadata |
fadata containing synthesis results. |
toDo |
fatty acids to analyse. |
R2Thr |
positive numeric between 0 and 1 specifying the minimum R2 allowed for fits. |
maxiter |
parameter passed to nls.control. Positive integer specifying the maximum number of iterations allowed. |
maxconvergence |
positive integer specifying the maximum number of successes before choosing the winning model. |
D1 |
positive numeric vector with values between 0 and 1 specifying the contribution of acetate M+1. If NA it is estimated. |
D2 |
positive numeric vector with values between 0 and 1 specifying the contribution of acetate M+2. If NA it is estimated. |
P |
overdispersion parameter. If NA it is estimated (quasi-multinomial distribution). If set to 0, no overdispersion is assumed (multinomial distribution). |
startpoints |
positive integer specifying the number of starting points for each parameter to be estimated. |
parameters |
parameters to be estimated for each fatty acid. It can be modified to change them or to add new fatty acids (adding new rows). |
verbose |
print information messages. |
De novo-synthesis analysis results.
M Isabel Alcoriza-Balaguer <maribel_alcoriza@iislafe.es>
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