plot.flimboot: Plot function for '"flimboot"' objects.
In FLIM: Farewell’s Linear Increments Model

Description Usage Arguments Details Value Author(s)

View source: R/plot.flimboot.R

Plots hypothetical mean responses for a longitudinal dataset reconstructed with flim, together with point wise bootstrapped confidence bands.

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## S3 method for class 'flimboot'
plot(x, response, grouping=NULL, col=1:20, ylab="Response",
                          xlab="Times", ylim=NULL, main=NULL, ...)

`x`	`"flimboot"` object from using `flimboot`.
`response`	a response variable in the model formula.
`grouping`	optional group/factor variable in the model formula.
`col`	optional colors for each level of the group variable.
`ylab`	title for the y axis.
`xlab`	title for the x axis.
`ylim`	range limit for the y axis; if nothing is specified it will auto adjust.
`main`	an overall title for the plot
`...`	additional arguments passed to `plot`, except `lty` which should be left unspecified.

Note that here the hypothetical mean responses are plotted with full-drawn lines, and confidence bands are in the same color but stipulated. The observed mean responses are not plotted. The confidence bands are calculated as hypothetical mean response +- two times the bootstrap standard deviation at each time point. The standard error estimates are available with flimSD, see flim for example on usage.

Mean response plot with point wise bootstrap confidence bands.

Rune Hoff

FLIM documentation built on May 29, 2017, 11:30 p.m.