print.summary.penmodel_cmp: Print method for 'summary.penmodel_cmp' of a fitted competing...

In FamEvent: Family Age-at-Onset Data Simulation and Penetrance Estimation

Print method for summary.penmodel_cmp of a fitted competing risks penetrance model.

Description

Prints a short summary of parameter and penetrance estimates of a 'summary.penmodel_cmp' object.

Usage

## S3 method for class 'summary.penmodel_cmp'
print(x, digits = max(3, getOption("digits") - 3),
  signif.stars=TRUE, ...)

Arguments

x	An object class of 'summary.penmodel_cmp', a result of a call to summary.penmodel_cmp.
digits	Number of significant digits to use when printing.
signif.stars	Logical; if TRUE, provides stars to hightlight significant p-values. Default is TRUE.
...	Further arguments passed to or from other methods.

Value

Prints a summary of parameter estimates, their standard errors, t-statistics and corresponding two-sided p-values and additionally indicates significance stars if signif.stars is TRUE.

Also prints penetrance estimates for each event by age 70 specific to gender and mutation-status subgroups along with their standard errors and 95% confidence intervals.

Returns an object of class 'summary.penmodel_cmp'.

Author(s)

Yun-Hee Choi

See Also

penmodel_cmp, print.penmodel_cmp, summary.penmodel_cmp

FamEvent documentation built on May 29, 2024, 6:22 a.m.