NorwegianFrequencies: A list of markers with allele names and frequencies

In Familias: Probabilities for Pedigrees Given DNA Data

A list of markers with allele names and frequencies

Description

The information represents allele frequencies for a range of different markers based on a data base in Norway.

Usage

data(NorwegianFrequencies)

Format

A list with named components, with names corresponding to the names of the loci. Each component is a vector of frequencies, with the names attribute of the vector equal to the names of the alleles.

Source

Norwegian Institute of Public Health, Department of Family Genetics: Dupuy et al: Frequency data for 35 autosomal STR markers in a Norwegian, an East African, and East Asian and Middle Asian population and simulation of adequate database size. Forensic Science International: Genetics Supplement Series, Volume 4, issue 1, 2013

Examples

data(NorwegianFrequencies)

#Displaying the Norwegian frequencies of the 
NorwegianFrequencies$TPOX

#Generating a FamiliasLocus with these frequencies
FamiliasLocus(NorwegianFrequencies$TPOX)

#Including a non-zero male mutation rate
FamiliasLocus(NorwegianFrequencies$TPOX, maleMutationRate = 0.005)

#Listing the names of available markers
names(NorwegianFrequencies)

Familias documentation built on May 29, 2024, 10:49 a.m.