plot.FamiliasPedigree: Plotting function for FamiliasPedigree objects

In Familias: Probabilities for Pedigrees Given DNA Data

Description

The function piggybacks the plot function for pedigree objects from the kinship2 package to create a plotting function for FamiliasPedigree objects. Before conversion to a pedigree object, additional parents are added to the pedigree so that each person has either zero or two parents within the pedigree.

Usage

## S3 method for class 'FamiliasPedigree'
plot(x, y, ...)

Arguments

x	An object of class FamiliasPedigree
y	Not used in this printing function
...	Other arguments are transferred to the plot.pedigree function of the kinship2 package.

Details

Graphical parameters used in the plot.pedigree function may be input via the plot.FamiliasPedigree function.

Value

A plot is produced.

Author(s)

Petter Mostad [e-mail]

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.
ped <- FamiliasPedigree(id = c("child", "AF"), momid = c(NA, NA), 
       dadid = c("AF", NA), sex = c("male", "male"))
plot(ped)
dev.new()
plot(ped, symbolsize = 2, cex = 2, family = "mono")

Example output

Loading required package: kinship2
Loading required package: Matrix
Loading required package: quadprog
Loading required package: paramlink
Loading required package: Rsolnp

Familias documentation built on May 2, 2019, 6:33 a.m.