density_plots: density_plots

In Fiscore: Effective Protein Structural Data Visualisation and Exploration

Description

Function plots a density plot set for phi/psi angle distributions, Fi-score and normalised B-factor. As well as 3D visualisation of angle distribution for every residue. The plots can be used for a quick assessment of the overall parameters.

Usage

density_plots(pdb_df, model_report)

Arguments

pdb_df	Requires a PDB data frame generated by PDB_prepare
model_report	Optional parameter to include data from cluster_ID

Value

multiple plots

Examples

path_to_processed_PDB<- system.file("extdata", "pdb_df.tabular", package="Fiscore")
# basic usage of density_plots
pdb_df<-read.table(path_to_processed_PDB)
density_plots(pdb_df)

Fiscore documentation built on Sept. 5, 2021, 5:51 p.m.