phi_psi_bar_plot: phi_psi_bar_plot

In Fiscore: Effective Protein Structural Data Visualisation and Exploration

Description

Function to plot PDB file dihedral angle distribution per amino acid using a bar plot. NOTE: some PDB files have breakages in their amino acid sequences; that is, some residues might be missing and it will be reflected in the plot via empty spaces

Usage

phi_psi_bar_plot(pdb_df)

Arguments

pdb_df

Requires a PDB data frame generated by PDB_prepare

Value

Bar plot

Examples

path_to_processed_PDB<- system.file("extdata", "pdb_df.tabular", package="Fiscore")
# basic usage of phi_psi_bar_plot
pdb_df<-read.table(path_to_processed_PDB)
phi_psi_bar_plot(pdb_df)

Fiscore documentation built on Sept. 5, 2021, 5:51 p.m.