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README.md
In FuncDiv: Compute Contributional Diversity Metrics
FuncDiv
FuncDiv is an R package for computing contributional diversity of joint taxa-function data.
It is described in this paper:
Gavin M. Douglas, Sunu Kim, Morgan G. I. Langille, B. Jesse Shapiro. 2023. Efficient computation of contributional diversity metrics from microbiome data with FuncDiv. Bioinformatics 39 (1): btac809. DOI: 10.1093/bioinformatics/btac809
All feedback is appreciated! Please open an issue on this repository if you would like to ask a question or make a comment.
Please see our wiki site for the documentation.
Licensing note: This repository contains modified code (specifically in R/beta_workflow.R and src/rbiom_par_unifrac.cpp) from version 1.0.3 of the rbiom R package (link to original source code). The original code and FuncDiv are distributed under GNU Affero General Public Licenses.
Try the FuncDiv package in your browser
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FuncDiv documentation built on March 31, 2023, 8:12 p.m.
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FuncDiv
FuncDiv is an R package for computing contributional diversity of joint taxa-function data.
It is described in this paper: Gavin M. Douglas, Sunu Kim, Morgan G. I. Langille, B. Jesse Shapiro. 2023. Efficient computation of contributional diversity metrics from microbiome data with FuncDiv. Bioinformatics 39 (1): btac809. DOI: 10.1093/bioinformatics/btac809
All feedback is appreciated! Please open an issue on this repository if you would like to ask a question or make a comment.
Please see our wiki site for the documentation.
Licensing note: This repository contains modified code (specifically in R/beta_workflow.R and src/rbiom_par_unifrac.cpp) from version 1.0.3 of the rbiom R package (link to original source code). The original code and FuncDiv are distributed under GNU Affero General Public Licenses.
Try the FuncDiv package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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