gen.simuSampleFreq: Gene dropping simulations - Frequencies

In GENLIB: Genealogical Data Analysis

Gene dropping simulations - Frequencies

Description

Returns the number of alleles transmitted to specified probands from ancestors

Usage

gen.simuSampleFreq( gen, pro, ancestors, stateAncestors, simulNo = "5000")

Arguments

gen	An object of class GLgen obtained with gen.genealogy, gen.lineages or gen.branching. Required.
pro	Vector of proband id numbers to be included. Required.
ancestors	Vector of ancestors id numbers to be included. Required.
stateAncestors	Required vector indicating, for each ancestor in ancestors, the genotype state: 0 = no disease allele present 1 = 1 disease allele present 2 = 2 disease alleles present
simulNo	Number of simulations to perform. Default is 5000.

Value

A data frame containing for each row (one row per proband): Alleles.transmitted.0 Alleles.transmitted.1 Alleles.transmitted.2

See Also

gen.genealogy gen.simuProb gen.simuSet gen.simuSample

Examples

data(geneaJi) 
genJi<-gen.genealogy(geneaJi) 
gen.simuSampleFreq(genJi, pro=c(1,29), ancestors=c(20,25),stateAncestors=c(2,1), simulNo = 1000)

GENLIB documentation built on May 29, 2024, 9:42 a.m.