clin.data: Example T-ALL Dataset Clinical Data

In GRIN2: Genomic Random Interval (GRIN)

Example T-ALL Dataset Clinical Data

Description

Clinical data file showing demographic and clinical outcomes of 265 newly diagnosed T-cell Acute Lymphoblastic Leukemia (T-ALL) patients that was reported by Liu, Yu, et al. (2017).

Usage

clin.data

Format

clin.data

A data frame with 265 rows and 11 columns:

ID

Patient identifier

Sex

Patient gender

Race

Patient race

Age_Days

Patient age in days

WBC

White Blood Cell (WBC) count

MRD29

Minimal Residual Disease (MRD) percentage

MRD.binary

MRD as a categorical variable (0 if MRD<=0.1 or 1 if MRD>0.1)

os.time

Overall survival time in years (time between diagnosis and either the last follow-up or death)

os.censor

Survival status (0=alive at the last follow-up or, 1=dead)

efs.time

Event-free survival time in years

efs.censor

Event indicator (0=censored without event or, 1=event)

Source

Data was extracted from the supplementary material tables of the published Liu, Yu, et al. (2017) manuscript https://www.nature.com/articles/ng.3909#Sec27 and the publicly available clinical data on TARGET database. The two files were merged and selected list of variables were kept in the final clinical data file.

GRIN2 documentation built on April 4, 2025, 1:41 a.m.